Evidence map›Paper›PMID 41704020›Full record

ArticleProteomics. Clinical applications2026

A Network-Based Association of IBD and Colorectal Cancer Using Proteomics Data.

Jaiya Dhami, Swarnima Kollampallath Radhakrishnan, Dominic Russ, Sudip Mondal, Abdulrahman Alzarooni, Laura Bravo Merodio, Niharika A Duggal, Ruchi Gupta, Animesh Acharjee

Abstract read
In one paragraph

Article in Proteomics. Clinical applications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jaiya DhamiCancer and Genomic Sciences, School of Medical Sciences, College of Medicine and Health, University of, Birmingham, UK.
Swarnima Kollampallath RadhakrishnanCancer and Genomic Sciences, School of Medical Sciences, College of Medicine and Health, University of, Birmingham, UK.
Dominic RussCancer and Genomic Sciences, School of Medical Sciences, College of Medicine and Health, University of, Birmingham, UK.
Sudip MondalCancer and Genomic Sciences, School of Medical Sciences, College of Medicine and Health, University of, Birmingham, UK.
Abdulrahman AlzarooniCancer and Genomic Sciences, School of Medical Sciences, College of Medicine and Health, University of, Birmingham, UK.
Laura Bravo MerodioCancer and Genomic Sciences, School of Medical Sciences, College of Medicine and Health, University of, Birmingham, UK.
Niharika A DuggalMRC-Versus Arthritis Centre For Musculoskeletal Ageing Research, Birmingham, UK.
Ruchi GuptaSchool of Chemistry, University of Birmingham, Birmingham, UK.ORCID 0000-0001-6456-8007
Animesh AcharjeeCancer and Genomic Sciences, School of Medical Sciences, College of Medicine and Health, University of, Birmingham, UK.ORCID 0000-0003-2735-7010

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundColorectal cancer (CRC) is a major cause of morbidity and mortality, with chronic inflammation from inflammatory bowel disease (IBD) representing a well-established risk factor. Clarifying shared molecular mechanisms may facilitate early detection and prevention strategies.

methodsProteomic data from the UK Biobank were analysed using the Olink proximity extension assay for seven CRC-associated proteins (TFF3, TFF1, AHCY, RETN, LCN2, SELE and CEACAM5) previously identified via machine learning. Expression levels in CRC and IBD cases were compared with controls. Multilayer interaction networks, incorporating protein-protein, protein-metabolite and transcription factor-protein interactions, were generated using OmicsNet. Findings were validated in the Colonomics transcriptomic dataset.

resultsAll seven proteins were significantly upregulated in CRC; six (excluding CEACAM5) were also elevated in IBD. Network analysis identified AHCY and LCN2 as central hubs linking inflammatory and metabolic pathways. NF-κB and GATA2 emerged as recurrent transcriptional regulators. Colonomics validation confirmed upregulation of AHCY, LCN2 and SELE in CRC tissues.

conclusionsThis multi-omics network analysis reveals a shared molecular framework between IBD and CRC, with inflammation as a key driver of colorectal carcinogenesis.

Indexed as

Colorectal NeoplasmsInflammatory Bowel DiseasesProteomicsHumansMultiomicsProtein Interaction Mapscolon cancerIBDnetwork analysisomicsUK‐Biobank

Identifiers

PMID41704020
PMCPMC12914161

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.