Evidence map›Paper›PMID 41702399›Full record

ArticleCell2026

Extracellular matrix sensing regulates intratumoral heterogeneity of autophagic flux.

Mohamad Assi, Ruohong Wang, Emily A Kawaler, Albert S W Sohn, M Zahidunnabi Dewan, Despoina Kalfakakou, Joel Encarnacion-Rosado, Kevin S Kapner, Koelina Ganguly, Joao A Paulo and 4 more

Abstract read
In one paragraph

Article in Cell, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Mohamad AssiDepartment of Radiation Oncology, New York University Langone Health, New York, NY, USA; Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA.
Ruohong WangDepartment of Radiation Oncology, New York University Langone Health, New York, NY, USA; Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA.
Emily A KawalerPerlmutter Cancer Center, New York University Langone Health, New York, NY, USA.
Albert S W SohnDepartment of Radiation Oncology, New York University Langone Health, New York, NY, USA; Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA.
M Zahidunnabi DewanDepartment of Experimental Pathology, New York University Langone Health, New York, NY, USA.
Despoina KalfakakouDivision of Precision Medicine, Department of Medicine, New York University Langone Health, New York, NY, USA.
Joel Encarnacion-RosadoDepartment of Radiation Oncology, New York University Langone Health, New York, NY, USA; Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA.
Kevin S KapnerDana-Farber Cancer Institute, Boston, MA, USA.
Koelina GangulyDepartment of Radiation Oncology, New York University Langone Health, New York, NY, USA; Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA.
Joao A PauloDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.
Diane M SimeonePerlmutter Cancer Center, New York University Langone Health, New York, NY, USA; Moores Cancer Center, UC San Diego Health, San Diego, CA, USA.
Andrew J AguirreDana-Farber Cancer Institute, Boston, MA, USA.
Robert S BanhDepartment of Biochemistry and Molecular Pharmacology, New York University Langone Health, New York, NY, USA.
Alec C KimmelmanDepartment of Radiation Oncology, New York University Langone Health, New York, NY, USA; Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA. Electronic address: alec.kimmelman@nyulangone.org.

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MARK Reid PHILIPS · 1985 to 2026
$83.1M
The RAS and P13K Pathways in Pancreatic AdenocarcinomaP01CA117969 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KALLURI, RAGHU · 2006 to 2025
$41.7M
Identifying Metabolic Dependencies of Pancreatic CancersR35CA232124 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KIMMELMAN, ALEC · 2018 to 2024
$6.5M
Targeting the autophagy-lysosome system to block pancreatic cancerR01CA251726 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PERERA, RUSHIKA MIRIAM · 2021 to 2025
$1.8M
Elucidating The Adaptive Role Of Serine Codons During Pancreatic Tumorigenesis - Diversity SupplementR37CA289040 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Robert Singhung Banh · 2024 to 2026
$1.8M
NCI NIH HHS P01 CA117969NCI NIH HHS P30 CA016087NCI NIH HHS R01 CA251726NCI NIH HHS R35 CA232124NCI NIH HHS R37 CA289040
6 · The paper itself

Abstract

Autophagy, a programmed self-eating process, underlies the progression of multifactorial diseases like pancreatic ductal adenocarcinoma (PDA). Except for nutrient availability, the contribution of microenvironmental factors to autophagy regulation is not well understood. Through integrating functional genomics and tumor-like 3D cultures, we show that human PDA cells regulate their autophagy levels by sensing the extracellular matrix (ECM) via the integrinα3-Hippo-YAP1 axis. The spatial proximity of PDA cells to the ECM shapes their intracellular autophagy levels, leading to heterogeneous biological responses. Specifically, PDA cells with low autophagy levels are proliferative, whereas those with high autophagy levels display better tolerance to chemotherapies. Targeting the ECM-mediated autophagy regulation reduces autophagic heterogeneity, alters PDA growth, and shapes antitumor responses to FDA-approved therapies. In summary, we have characterized a non-metabolic regulation of autophagy through ECM sensing, opening the possibility to investigate and target ECM-specific outputs in diseases.

Indexed as

AutophagyCarcinoma, Pancreatic DuctalExtracellular MatrixPancreatic NeoplasmsAdaptor Proteins, Signal TransducingAnimalsCell Line, TumorCell ProliferationHumansSignal TransductionTumor MicroenvironmentYAP-Signaling ProteinsAdaptor Proteins, Signal TransducingYAP1 protein, humanYAP-Signaling Proteinsautophagycancerextracellular matrix sensingfibrosislysosome

Identifiers

PMID41702399
PMCPMC13452030

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.