Evidence map›Paper›PMID 41701782›Full record

ArticlePLoS genetics2026

Regulatory rewiring drives intraspecies competition in Bacillus subtilis.

Margarita Kalamara, Alistair Bonsall, Jonathan Griffin, Joana Carneiro, Marek Gierlinski, Lukas Eigentler, David Stevenson, Amy Wood, Michael Porter, Helge C Dorfmueller and 3 more

Erratum issuedAbstract read
In one paragraph

Article in PLoS genetics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Formation of a swelling gel underlies a morphological transition inbioRxiv : the preprint server for biology · 2026
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Margarita KalamaraDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, Scotland.ORCID https://orcid.org/0000-0003-4434-3104
Alistair BonsallDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, Scotland.ORCID https://orcid.org/0009-0008-2494-8257
Jonathan GriffinDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, Scotland.ORCID https://orcid.org/0009-0009-0967-4427
Joana CarneiroDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, Scotland.ORCID https://orcid.org/0000-0003-4531-4348
Marek GierlinskiDivision of Computational Biology, School of Life Sciences, University of Dundee, Dundee, Scotland.ORCID https://orcid.org/0000-0001-9149-3514
Lukas EigentlerWarwick Mathematics Institute, University of Warwick, Coventry, United Kingdom.ORCID https://orcid.org/0000-0002-8333-8132
David StevensonDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, Scotland.ORCID https://orcid.org/0000-0003-1812-2658
Amy WoodDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, Scotland.ORCID https://orcid.org/0009-0009-8117-4611
Michael PorterDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, Scotland.ORCID https://orcid.org/0000-0001-9573-5066
Helge C DorfmuellerDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, Scotland.ORCID https://orcid.org/0000-0003-1288-044X
Cait E MacPheeNational Biofilms Innovation Centre, School of Physics and Astronomy, University of Edinburgh, Edinburgh, United Kingdom.ORCID https://orcid.org/0000-0001-8313-8387
James C AbbottDivision of Computational Biology, School of Life Sciences, University of Dundee, Dundee, Scotland.ORCID https://orcid.org/0000-0001-7701-4249
Nicola R Stanley-WallDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, Scotland.ORCID https://orcid.org/0000-0002-5936-9721

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intraspecies interactions shape microbial community structure and evolution, yet the mechanisms determining competitive outcomes among closely related strains remain unclear. The soil bacterium Bacillus subtilis is a model for microbial social interactions, where quorum-sensing systems regulate cooperation and antagonism. Here, we take a multifaceted approach to dissect the role of quorum-sensing regulation in competitive fitness. Isolate NCIB 3610 carries a signal unresponsive RapP-PhrP module that alters quorum-sensing control and promotes faster growth. Modelling and mutant analysis demonstrate that the small differences in growth rate conferred by RapP-PhrP3610 are sufficient to drive competitive exclusion. The importance of quorum sensing control is further exemplified by experimental evolution of distinct wild isolates, which revealed recurrent mutations in the sensor kinase comP, which phenocopy complete comP or comA deletions and confer a growth-linked competitive advantage. Key quorum sensing mechanisms are abandoned even in structured microbial communities, where it might be expected that communal traits are favoured. Furthermore, a phylogenomic survey of 370 B. subtilis genomes identified disruptive comP mutations in ~16% of isolates. However, growth rate alone does not explain all interaction outcomes as even isogenic strains with equivalent doubling times differ in competitiveness. Transcriptomic profiling and validation experiments implicated a type VII secretion system toxin as an additional effector. These findings reveal that disruption of quorum-sensing pathways, whether naturally or through selection, provides a rapid route to competitive advantage, highlighting a fundamental trade-off between communal signalling and individual fitness in microbial populations.

Identifiers

PMID41701782
PMCPMC12935306

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.