Evidence map›Paper›PMID 41700107›Full record

ReviewBioEssays : news and reviews in molecular, cellular and developmental biology2026

Eukaryogenesis: Did an Oxidative Crucible Result in Misleading Bioinformatic Analyses?

Dave Speijer

Abstract readReview
In one paragraph

Review in BioEssays : news and reviews in molecular, cellular and developmental biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Eukaryogenesis: Did an Oxidative Crucible Result in Misleading Bioinformatic Analyses?BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Dave SpeijerMedical Biochemistry, Amsterdam UMC Location University of Amsterdam, Meibergdreef 9, Amsterdam, The Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, Nature published a large-scale analysis ("Dated gene duplications elucidate the evolutionary assembly of eukaryotes" by Christopher Kay and co-workers) that seems to put an end to symbiogenic models for eukaryogenesis. They state that the pre-mitochondrion arrives late, after practically all of the signature eukaryotic characteristics have evolved independently. However, this conclusion is based on reconstructed timescales for the gene duplications allowing these crucial eukaryotic cell functions. The reconstruction might be fundamentally flawed, because enhanced internal ROS formation upon endosymbiont entry would lead to both high mutation rates and strong selection for antioxidant as well as repair functions. As the endosymbiont had co-evolved with molecular oxygen, while the archaeal host had not, a phylogenetic analysis might misconstrue the higher rate of change in the host as indicative of much longer timescales for host gene duplications.

Indexed as

Computational BiologyEukaryotaEukaryotic CellsAnimalsEvolution, MolecularGene DuplicationOxidation-ReductionPhylogenyReactive Oxygen SpeciesSymbiosisReactive Oxygen Species

Identifiers

PMID41700107
PMCPMC12910325

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.