Evidence map›Paper›PMID 41697974›Full record

ArticleDatabase : the journal of biological databases and curation2026

Epilepsy disease classification: a community effort to enhance the Mondo Disease Ontology.

Nicole Vasilevsky, Sarah Gehrke, Kathleen Mullen, Subit Barua, Ian Braun, Tobias Brünger, Curtis Coughlin, Alina Ivaniuk, Daniel Korn, Dennis Lal and 10 more

Abstract read
In one paragraph

Article in Database : the journal of biological databases and curation, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Nicole VasilevskyCritical Path Institute, 1840 E River Rd, Suite 100 Tucson, AZ 85718-5960, United States.ORCID 0000-0001-5208-3432
Sarah GehrkeThe University of North Carolina at Chapel Hill, 120 Mason Farm Road, 5000 D Genetic Medicine Building CB#7264, Chapel Hill, NC 27599-7264, United States.
Kathleen MullenThe University of North Carolina at Chapel Hill, 120 Mason Farm Road, 5000 D Genetic Medicine Building CB#7264, Chapel Hill, NC 27599-7264, United States.ORCID 0000-0002-5002-8648
Subit BaruaDepartment of Pathology, Anatomy & Laboratory Medicine, West Virginia University, Health Sciences Campus, 763 Chestnut Ridge Rd. Morgantown, WV 26505, United States.
Ian BraunCritical Path Institute, 1840 E River Rd, Suite 100 Tucson, AZ 85718-5960, United States.ORCID 0000-0002-2389-9288
Tobias BrüngerThe University of Texas Health Science Center at Houston, 7000 Fannin, Suite 1706. Houston, Texas 77030, United States.
Curtis CoughlinUniversity of Colorado Anschutz, 13001 E 17th Pl, Aurora, CO 80045, United States.
Alina IvaniukMayo Clinic Florida, 4500 San Pablo Road Jacksonville, FL 32224, United States.
Daniel KornThe University of North Carolina at Chapel Hill, 120 Mason Farm Road, 5000 D Genetic Medicine Building CB#7264, Chapel Hill, NC 27599-7264, United States.ORCID 0000-0002-1780-9872
Dennis LalThe University of Texas Health Science Center at Houston, 7000 Fannin, Suite 1706. Houston, Texas 77030, United States.ORCID 0000-0002-5173-9636
Stephanie MarshCritical Path Institute, 1840 E River Rd, Suite 100 Tucson, AZ 85718-5960, United States.
Elaine O'LoughlinCURE Epilepsy, 420 N. Wabash Avenue, Suite 650. Chicago, IL 60611, United States.
Daniel OlsonCritical Path Institute, 1840 E River Rd, Suite 100 Tucson, AZ 85718-5960, United States.
Yousif ShwetarThe University of North Carolina at Chapel Hill, 120 Mason Farm Road, 5000 D Genetic Medicine Building CB#7264, Chapel Hill, NC 27599-7264, United States.
Christalena SofocleousNational and Kapodistrian University of Athens School of Medicine, 75 Mikras Asias Street, Goudi, 11527 Athens, Greece.
Vanessa Vogel-FarleyRare Epilepsy Network, 12042 Cedar Creek Rd, Cedarburg, WI 53012, United States.
Heidi GrabenstatterCritical Path Institute, 1840 E River Rd, Suite 100 Tucson, AZ 85718-5960, United States.
Melissa HaendelThe University of North Carolina at Chapel Hill, 120 Mason Farm Road, 5000 D Genetic Medicine Building CB#7264, Chapel Hill, NC 27599-7264, United States.ORCID 0000-0001-9114-8737
Christopher MungallGenomics, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, United States.ORCID 0000-0002-6601-2165
Sabrina ToroThe University of North Carolina at Chapel Hill, 120 Mason Farm Road, 5000 D Genetic Medicine Building CB#7264, Chapel Hill, NC 27599-7264, United States.

Funding

Improvements to the LinkML framework to support the Phenomics First open science resourceRM1HG010860 · NHGRI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HAENDEL, MELISSA A, MUNGALL, CHRISTOPHER J · 2020 to 2024
$10.3M
FDA HHSNHGRI NIH HHS 5RM1HG010860NHGRI NIH HHS RM1 HG010860NIH
6 · The paper itself

Abstract

motivationEpilepsy is a diverse group of neurological disorders affecting over 50 million people worldwide. While common epilepsy types are well studied, rare epilepsies-often severe and genetically complex-pose significant challenges in diagnosis, research, and treatment. Accurate and interoperable etiology and disease classifications are critical for improving data sharing, supporting clinical decision-making, and advancing rare disease research.

resultsTo enhance the accuracy of epilepsy-related disease concept representation within the Mondo Disease Ontology (Mondo), we conducted a series of expert-driven workshops in collaboration with the team from the Rare Disease Cures Accelerator-Data and Analytics Platform (RDCA-DAP). Specialists in epileptology, genetics, neurodevelopment, biomedical ontology, and patient community advocates systematically reviewed and revised the epilepsy hierarchy in Mondo, aligning it with the International League Against Epilepsy (ILAE) classification system. These updates include reclassification of epilepsy subtypes, including syndromes, age-related epilepsies, and developmental epileptic encephalopathies, resulting in a more granular, standardized, and clinically relevant structure. Mondo now offers an enhanced framework for integrating epilepsy data across resources, enabling improved interoperability and facilitating rare disease research and data curation, with continued efforts underway to further refine and expand this integration.

Indexed as

Biological OntologiesEpilepsyHumans

Identifiers

PMID41697974
PMCPMC12908683

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.