Evidence map›Paper›PMID 41693227›Full record

ArticleJournal of cachexia, sarcopenia and muscle2026

Loss of Myonuclei and Transcriptional Activity During Diaphragm Atrophy in Critically Ill Patients.

Wout J Claassen, Marloes van den Berg, Zhong Hua Shi, Rianne J Baelde, Sylvia Bogaards, Luuk Bonis, Heleen Hakkeling, Arezou Bamyani, Gerben J Schaaf, Albertus Beishuizen and 5 more

Abstract read
In one paragraph

Article in Journal of cachexia, sarcopenia and muscle, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Wout J ClaassenDepartment of Physiology, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.ORCID https://orcid.org/0000-0001-5154-7311
Marloes van den BergDepartment of Physiology, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.
Zhong Hua ShiDepartment of Physiology, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.
Rianne J BaeldeDepartment of Physiology, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.
Sylvia BogaardsDepartment of Physiology, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.
Luuk BonisDepartment of Physiology, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.
Heleen HakkelingDepartment of Physiology, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.
Arezou BamyaniDepartment of Physiology, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.
Gerben J SchaafCenter for Lysosomal and Metabolic Diseases, Erasmus University Medical Center, Rotterdam, the Netherlands.
Albertus BeishuizenIntensive care Center, Medisch Spectrum Twente, Enschede, the Netherlands.
Chris DickhoffDepartment of Surgery, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.
Reinier A BoonDepartment of Physiology, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.
Leo HeunksDepartment of Intensive Care Medicine, Radboudumc, Nijmegen, the Netherlands.
Tyler J KirbyDepartment of Physiology, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.
Coen A C OttenheijmDepartment of Physiology, Amsterdam UMC, location VUmc, Amsterdam, the Netherlands.ORCID https://orcid.org/0000-0002-8808-4813

Funding

Role of titin in the pathophysiology of diaphragm weakness during mechanical ventilationR01HL121500 · NHLBI · UNIVERSITY OF ARIZONA · PI Coen Ottenheijm · 2014 to 2026
$6.2M
Regulation of Myonuclear Turnover Dynamics in Multinucleated Muscle CellsR01AR084850 · NIAMS · UNIVERSITY OF KENTUCKY · PI Tyler Kirby, JOHN Joseph MCCARTHY · 2025 to 2026
$1.1M
NHLBI NIH HHS HL-121500NHLBI NIH HHS R01 HL121500NIAMS NIH HHS R01AR084850ZonMw 09120011910004
6 · The paper itself

Abstract

backgroundDiaphragm weakness frequently develops in critically ill patients and is explained by a combination of atrophy and myofiber dysfunction. Myofibers are large syncytial cells maintained by a population of myonuclei, which provide gene transcripts to a finite fiber volume, termed the myonuclear domain. Myonuclear number is a determinant of transcriptional capacity and therefore critical for diaphragm and peripheral muscle regeneration after critical illness. Changes in myonuclear number in myofibers undergoing atrophy have not been investigated in mechanically ventilated ICU patients, but they are of potential clinical importance. Our objective was to investigate if and how myonuclear number changes in the diaphragm of mechanically ventilated ICU patients and whether changes are associated with myofiber atrophy and clinical parameters.

methodsWe used a combination of transcriptomics, immunohistochemistry and confocal microscopy to study myonuclear alterations in the diaphragm and quadriceps biopsies from mechanically ventilated ICU patients (n = 24) and non-critically ill patients (n = 10).

resultsCompared to control patients, myonuclear number and myonuclear domain were reduced in critically ill patients with diaphragm myofiber atrophy (n = 14) (myonuclear number per mm of 133 [92-183] vs. 92 [83-105], p = 0.03 (slow myofibers) and 149 [118-189] vs. 88 [69-109], p = 0.004 (fast myofibers); myonuclear domain size was 44 [34-51] vs. 29 pL, p = 0.004 (slow myofibers) and 41 [39-48] vs. 27 pL, p = 0.001 (fast myofibers) of control patients and ICU patients with atrophy, respectively). Increased intrinsic apoptotic pathway activation was identified as a mechanism underlying myonuclear removal (percentage of apoptotic myonuclei of 0.64 [0.60-0.84] and 0.95 [0.84-1.2], p = 0.015 and increased percentage of activated caspase-3 positive myonuclei of 2,5 [1.6-3.3] vs. 5.7 [4.3-11], p = 0.001 in control patients and ICU patients with atrophy, respectively). Total transcriptional activity in myofibers decreased with myonuclear loss (RNA-Pol-2 Ser5 fluorescence intensity per fibre of 2.6 [2.2-3.3] vs. 5.8 [3.1-6.7] AU, p = 0.036 in control patients and ICU patients with atrophy, respectively). Furthermore, muscle stem cell number was reduced in the patients with diaphragm atrophy (PAX7 positive nuclei per myofiber of 0.10 [0.09-0.11] vs. 0.05 [0.04-0.07], p = 0.002 in control patients and ICU patients with atrophy, respectively). No correlation was found between myonuclear loss and duration or mode of mechanical ventilation.

conclusionsWe identified myonuclear loss due to intrinsic apoptotic pathway activation as a potential mechanism underlying diaphragm atrophy in mechanically ventilated patients. The loss of myonuclei may contribute to impaired regeneration of myofibers after critical illness. Duration and mode of mechanical ventilation are not the major drivers of these modifications.

Indexed as

Cell NucleusDiaphragmMuscular AtrophyTranscription, GeneticAgedCritical IllnessFemaleHumansMaleMiddle AgedRespiration, Artificialcritical carediaphragm weaknessmechanical ventilation

Identifiers

PMID41693227
PMCPMC12907519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.