Evidence map›Paper›PMID 41692716›Full record

ArticleBMC plant biology2026

Genetic diversity and morphological variation in wild Silene compacta Fischer genotypes from Türkiye.

Muharrem Arslan, Murat Kemal Avci, Turan Karadeniz, Esma Akkuş Arslan, Orhan Karakaya, Sadiye Peral Eyduran, Melekşen Akin, Birsen Yilmaz, Neelam Prabha Negi

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Article in BMC plant biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

9 authors.

Muharrem ArslanAydın Adnan Menderes University, Koçarlı Vocational School, Department of Park and Garden Plants, Aydın, Türkiye.ORCID http://orcid.org/0000-0002-9543-560X
Murat Kemal AvciAydın Adnan Menderes University, Faculty of Agriculture, Department of Agricultural Biotechnology, Department of Enzyme and Microbial Biotechnology, Aydın, Türkiye.ORCID http://orcid.org/0000-0001-5211-2352
Turan KaradenizPamukkale University, Faculty of Agriculture, Denizli, Türkiye.ORCID http://orcid.org/0000-0003-0387-7599
Esma Akkuş ArslanFig Research Institute, Aydın, Türkiye.ORCID http://orcid.org/0000-0002-4601-9503
Orhan KarakayaDepartment of Horticulture, Faculty of Agriculture, Sakarya University of Applied Sciences, Sakarya, Türkiye.
Sadiye Peral EyduranDepartment of Horticulture, Muğla Sıtkı Koçman University, Fethiye, Türkiye.
Melekşen AkinDepartment of Horticulture, Iğdır University, Iğdır, Türkiye. akinmeleksen@gmail.com.
Birsen YilmazDepartment of Biological Sciences, Tata Institute of Fundamental Research, Hyderabad, India. dytbirsen@gmail.com.
Neelam Prabha NegiPlant Biotechnology Division, CSIR-CIMAP, Lucknow, UP, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Silene compacta Fischer ex Hornem., a member of Caryophyllaceae family, is a wild plant with significant ornamental and ecological value, now threatened by habitat loss and climate change. This study assessed the genetic diversity of 40 S. compacta genotypes collected from four—geographically distinct regions of Türkiye (Bolu, İzmir, Isparta, and Nevşehir) using 26 morphological traits and 10 inter-simple sequence repeats (ISSR) primers. Principal Component Analysis of morphological data grouped the genotypes into five clusters, with the first two components explaining 61.5% of the total variation. ISSR analysis generated 145 bands, of which 140 were polymorphic and 5 monomorphic. The polymorphism rate in ISSR markers ranged between 86.67% and 100%, demonstrating substantial genetic diversity among the tested genotypes. The discriminatory power of ISSR primers was evaluated using polymorphism information content, with a mean value of 0.39, indicating a moderately high level of informativeness and allelic diversity among populations. In addition, Pearson correlation analysis of morphological traits revealed strong positive associations among floral and foliar parameters (r = 0.70–0.92, p < 0.01), confirming a high degree of morphological integration and developmental coordination within populations. While UPGMA and neighbor-joining dendrograms confirmed the genetic divergence among regional populations, complete regional separation was not observed, possibly due to the dominant nature of ISSR markers. Morphological and genetic data were not always congruent, indicating both environmental influence and underlying genetic variation. This integrated approach provides valuable insights into the genetic structure of S. compacta, for developing effective conservation strategies and guiding the management strategies and sustainable utilization of genetic resources.

Indexed as

Genetic VariationSileneGenotypeMicrosatellite RepeatsPolymorphism, GeneticGenetic diversityISSRMorphological variationOrnamental plantSilene compacta Fischer

Identifiers

PMID41692716
PMCPMC13014717

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.