Evidence map›Paper›PMID 41689096›Full record

ArticleJournal of translational medicine2026

A novel iPSC model of Bryant-Li-Bhoj neurodevelopmental/neurodegenerative syndrome demonstrates the role of histone H3.3 in chromatin dynamics, neuronal differentiation, and maturation.

Annabel K Sangree, Rajesh Angireddy, Janardhan P Bhattarai, Yingqi Wang, Laura M Bryant, Elisa A Waxman, Dana E Layo-Carris, Emily E Durham, Kaitlin A Katsura, Emily E Lubin and 4 more

Abstract read
In one paragraph

Article in Journal of translational medicine, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. A novel mouse model of rare neurodevelopmental disorder, TBCK Syndrome.bioRxiv : the preprint server for biology · 2026
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Annabel K Sangree *Department of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Rajesh Angireddy *Department of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA. ANGIREDDYR@chop.edu.
Janardhan P BhattaraiDepartment of Neuroscience, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, 19104, USA.
Yingqi WangDepartment of Neuroscience, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, 19104, USA.
Laura M BryantDepartment of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Elisa A WaxmanCenter for Cellular and Molecular Therapeutics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Dana E Layo-CarrisDepartment of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Emily E DurhamDepartment of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Kaitlin A KatsuraDepartment of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Emily E LubinDepartment of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Xiao Min WangDepartment of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Kelly J ClarkDepartment of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Minghong MaDepartment of Neuroscience, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, 19104, USA.
Elizabeth J BhojDepartment of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA. bhoje@chop.edu.ORCID 0000-0001-5748-3507

Funding

MEDICAL GENETICS RESEARCH TRAINING GRANTT32GM008638 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Rebecca Ganetzky · 1997 to 2026
$8.7M
Postdoctoral Training Program in Genomic MedicineT32HG009495 · NHGRI · UNIVERSITY OF PENNSYLVANIA · PI Katherine L. Nathanson, Bogdan Pasaniuc · 2017 to 2026
$4.2M
De novo mutations in replication-independent histone genes and an unexplored class of rare pediatric mendelian syndromesF30HD112125 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI Emily Elizabeth Lubin · 2024 to 2026
$102k
National Institute of Child Health and Human Development NICHD F30 1F30HD112125NHGRI NIH HHS T32 HG009495NHGRI NIH HHS T32HG009495NICHD NIH HHS F30 HD112125NIGMS NIH HHS 5T32GM008638NIGMS NIH HHS T32 GM008638
6 · The paper itself

Abstract

backgroundBryant-Li-Bhoj neurodevelopmental syndrome (BLBS) is neurogenetic disorder caused by variants in H3-3A and H3-3B, the two genes that encode histone H3.3. Ninety-nine percent of individuals with BLBS show developmental delay/intellectual disability, but the mechanism by which variants in H3.3 result in these phenotypes is not yet understood, limiting the therapeutic interventions available to individuals living with BLBS.

methodsHere, we investigate how one BLBS-causative variant, H3-3B p.Leu48Arg (L48R), affects neurodevelopment using an induced pluripotent stem cell model differentiated to 2D neural progenitor cells (NPCs), 2D forebrain neurons (FBNs), and 3D dorsal forebrain organoids (DFBOs). We employ a multi-omic approach in the 2D models to quantify the resulting changes in gene expression and chromatin accessibility. We used immunofluorescence (IF) staining to define the identities of cells in the 3D DFBOs and whole-cell patch clamp to investigate the electrophysiological properties of neurons in DFBOs.

resultsIn the 2D systems, we found dysregulated gene expression and chromatin accessibility affecting neuronal fate, adhesion, neurotransmission, and excitatory/inhibitory balance. Immunofluorescence of DFBOs corroborated altered proportions of radial glia and mature neuronal populations. Patch clamp recordings revealed decreased electrical activity in neurons from L48R DFBOs compared to control DFBOs.

conclusionsThese data provide the first mechanistic insights into the pathogenesis of BLBS from a human-derived model of neurodevelopment, which suggest that H3.3 L48R increases H3-3B expression, resulting in the hyper-deposition of H3.3 into the nucleosome, which underlies changes in gene expression and chromatin accessibility. Functionally, this causes dysregulation of cell adhesion, neurotransmission, and the balance between excitatory and inhibitory signaling. These results are a crucial step towards preclinical development and testing of targeted therapies for this and related disorders.

Indexed as

Cell DifferentiationChromatinHistonesInduced Pluripotent Stem CellsModels, BiologicalNeurodevelopmental DisordersNeuronsHumansNeurodevelopmentOrganoidsChromatinHistonesBrain organoidChromatinHistone H3.3iPSC-derived neuronsMendelian neurodevelopmental disorderMulti-omic analysisTranslational neurogenetics

Identifiers

PMID41689096
PMCPMC12903495

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.