Evidence map›Paper›PMID 41688530›Full record

ArticleScientific reports2026

Phylogenomic analysis shows underestimated species within Cupriavidus and the new species Cupriavidus phytohabitans sp. nov.

Erika-Yanet Tapia-García, Belén Chávez-Ramírez, Leslie-Mariana Morales-Ruíz, Ivan Arroyo-Herrera, Violeta Larios-Serrato, J Antonio Ibarra, Paulina Estrada-de Los Santos

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Erika-Yanet Tapia-GarcíaLaboratorio de Biotecnología Microbiana, Departamento de Microbiología, Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prol. Carpio y Plan de Ayala s/n. Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, Mexico.
Belén Chávez-RamírezLaboratorio de Fitopatología, Departamento de Microbiología, Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prol. Carpio y Plan de Ayala s/n. Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, Mexico.
Leslie-Mariana Morales-RuízLaboratorio de Biotecnología Microbiana, Departamento de Microbiología, Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prol. Carpio y Plan de Ayala s/n. Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, Mexico.
Ivan Arroyo-HerreraLaboratorio de Biotecnología Microbiana, Departamento de Microbiología, Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prol. Carpio y Plan de Ayala s/n. Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, Mexico.
Violeta Larios-SerratoLaboratorio de Biotecnología y Bioinformática Genómica, Departamento de Bioquímica, Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prol. Carpio y Plan de Ayala s/n. Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, Mexico.
J Antonio IbarraLaboratorio de Genética Microbiana, Departamento de Microbiología, Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, , Prol. Carpio y Plan de Ayala s/n. Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, Mexico.
Paulina Estrada-de Los SantosLaboratorio de Biotecnología Microbiana, Departamento de Microbiología, Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prol. Carpio y Plan de Ayala s/n. Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, Mexico. pestradadelossantos@gmail.com.

Funding

Secretaría de Investigación y Posgrado, Instituto Politécnico Nacional 2023-0831 and 2024-1040.
6 · The paper itself

Abstract

During a survey of nodule-associated bacteria from legume plants and soil collected in southern Mexico, several strains were obtained in Mexico City using Phaseolus vulgaris as a trap plant, inoculated with rhizospheric soil from the legume Acacia sp. collected in the state of Veracruz, a bordering state to the Gulf of Mexico. The 16S rRNA gene sequence analysis identified the strains AcVe19-1a

Indexed as

CupriavidusPhylogenyAcaciaDNA, BacterialGenome, BacterialGenomicsMexicoPhaseolusRhizosphereRNA, Ribosomal, 16SRoot Nodules, PlantSoil MicrobiologyDNA, BacterialRNA, Ribosomal, 16SCupriavidusNodulationNodule-associated bacteriaPhaseolus vulgarisRhizosphereTrap plant

Identifiers

PMID41688530
PMCPMC12982536

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.