Evidence map›Paper›PMID 41680783›Full record

ArticleCell communication and signaling : CCS2026

Enterococcus faecalis-induced bystander effect causes epigenetic alterations leading to aberrant TGF-β signaling and epithelial-mesenchymal transition.

Lili Xu, Tianqi Li, Chunhua Ma, Yuanyuan Ju, Lin Huang, Rongrong Jing, Haibo Li, Xingmin Wang

Abstract read
In one paragraph

Article in Cell communication and signaling : CCS, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Iron, Biofilm, and Colorectal Cancer: Mechanistic Insights Into Enterococcus faecalis Pathogenesis.APMIS : acta pathologica, microbiologica, et immunologica Scandinavica · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lili XuNantong Institute of Genetics and Reproductive Medicine, Affiliated Maternity and Child Healthcare Hospital of Nantong University, Nantong, 226018, Jiangsu, China.
Tianqi LiNantong Institute of Genetics and Reproductive Medicine, Affiliated Maternity and Child Healthcare Hospital of Nantong University, Nantong, 226018, Jiangsu, China.
Chunhua MaNantong Institute of Genetics and Reproductive Medicine, Affiliated Maternity and Child Healthcare Hospital of Nantong University, Nantong, 226018, Jiangsu, China.
Yuanyuan JuNantong Institute of Genetics and Reproductive Medicine, Affiliated Maternity and Child Healthcare Hospital of Nantong University, Nantong, 226018, Jiangsu, China.
Lin HuangDepartment of Gastroenterology, Affiliated Maternity and Child Healthcare Hospital of Nantong University, Nantong, 226018, Jiangsu, China.
Rongrong JingDepartment of Clinical Laboratory, Affiliated Hospital of Nantong University, Nantong, 226001, Jiangsu, China.
Haibo LiDepartment of Clinical Laboratory, Affiliated Maternity and Child Healthcare Hospital of Nantong University, Nantong, Jiangsu, China.
Xingmin WangNantong Institute of Genetics and Reproductive Medicine, Affiliated Maternity and Child Healthcare Hospital of Nantong University, Nantong, 226018, Jiangsu, China. xingmin-wang@ntu.edu.cn.ORCID http://orcid.org/0000-0001-5655-9012

Funding

Jiangsu Distinguished Medical Expert Program 2019Jiangsu Health Innovation Team Program 2020Nantong Commission of Health MA2021029National Natural Science Foundation of China 81972783
6 · The paper itself

Abstract

backgroundEnterococcus faecalis promotes colorectal cancer (CRC) in murine models through the microbiota-induced bystander effect (MIBE), but its potential to induce epigenetic changes remains unexplored. This study investigates how E. faecalis-infected macrophages induce epigenetic alterations contributing to CRC pathogenesis.

methodsRAW264.7 macrophages were infected with E. faecalis OG1RF (superoxide-producing), WY84 (superoxide-deficient), or PBS. Conditioned media were collected and used to treat IEC-6 intestinal epithelial cells. Genome-wide H3 acetylation was assessed using chromatin immunoprecipitation sequencing (ChIP-seq). Western blotting and immunofluorescence staining were employed to investigate E. faecalis-induced histone H3 acetylation and associated signaling pathways. Furthermore, colonic organoid cultures and E. faecalis-colonized Il10−/− mouse models were utilized to validate the in vitro findings.

resultsConditioned medium (CM) from E. faecalis-infected macrophages significantly increased histone H3 acetylation at lysines 27 and 9 (H3K27ac/H3K9ac) in IEC-6 intestinal epithelial cells and murine colonic organoids, with similar findings validated in vivo in E. faecalis-colonized Il10−/− mice. ChIP-seq revealed genome-wide alterations in H3K27ac in cells treated with CM from E. faecalis-infected macrophages, leading to activation of CRC-associated signaling pathways. Metabolomic analysis identified 12-hydroxyeicosatetraenoic acid (12-HETE), produced by E. faecalis-infected macrophages, as a mediator of bystander effect promoting H3 acetylation. Furthermore, CM from E. faecalis-infected macrophages and 12-HETE decreased E-cadherin and increased vimentin expression in IEC-6 cells, indicating epithelial-mesenchymal transition—a finding corroborated by reduced E-cadherin levels in intestinal biopsies from E. faecalis-colonized Il10−/− mice.

conclusionOur results indicate that E. faecalis-infected macrophages produce 12-HETE, which promotes epigenetic alterations and induces EMT in intestinal epithelial cells via a bystander effect. These findings strengthen the link between gut microbiota and innate immunity in CRC development, highlighting potential targets for innovative prevention and therapeutic strategies.

trial registrationNot applicable.

Indexed as

Bystander EffectEnterococcus faecalisEpigenesis, GeneticEpithelial-Mesenchymal TransitionSignal TransductionTransforming Growth Factor betaAcetylationAnimalsCulture Media, ConditionedHistonesInterleukin-10MacrophagesMiceMice, Inbred C57BLRatsRAW 264.7 CellsCulture Media, ConditionedHistonesInterleukin-10Transforming Growth Factor beta12-HETEAlox12EMTEnterococcus faecalisEpigenetic alterationMacrophageMicrobiota-induced bystander effectTGF-β signaling

Identifiers

PMID41680783
PMCPMC12997996

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.