Evidence map›Paper›PMID 41680621›Full record

ArticleBMC plant biology2026

Integrative metabolomic and genetic analysis of in vitro regenerated Populus alba in response to nano hydroxyapatite.

Asmaa Abdelsalam, Ehab Mahran, Arezue Boroujerdi, Ashraf B Abdel Razik, Mohamed F Ahmed, Eman Tawfik

Abstract read
In one paragraph

Article in BMC plant biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Asmaa AbdelsalamBotany and Microbiology Department, Faculty of Science, Capital University (Formerly Helwan University), Cairo, 11790, Egypt. asmaa_abdulsalam@science.helwan.edu.eg.
Ehab MahranCAMAG Chemical Products and Adsorption Technology AG, Muttenz, 4132, Switzerland.
Arezue BoroujerdiChemistry Department, Claflin University, Orangeburg, SC, 29115, USA.
Ashraf B Abdel RazikGenetic Department, Faculty of Agriculture, Ain Shams University, Cairo, Egypt.
Mohamed F AhmedDry and Saline Farming Technology Department, Arid Land Agricultural Graduate Studies and Research Institute, Ain Shams University, Cairo, Egypt.
Eman TawfikBotany and Microbiology Department, Faculty of Science, Capital University (Formerly Helwan University), Cairo, 11790, Egypt.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNano-elicitation has gained increasing attention as a strategy to enhance plant growth and metabolic performance in vitro. However, the genetic and metabolomic consequences of nano-hydroxyapatite (nHAp) application in woody plant species remain poorly understood. This study examined the influence of biosynthesized nHAp on growth performance, genetic variation, metabolomic remodelling, and metabolic pathway regulation in in vitro regenerated Populus alba.

resultsThe biosynthesized nHAp exhibited a rod-like morphology with average dimensions of 60 nm × 213 nm and a negative surface charge (zeta potential − 22.1 mV). The effects of nHAp were examined at three concentration levels: 20, 40, and 60 mg/L. Supplementation with nHAp significantly improved vegetative growth parameters, including weight, shoot and root length, leaf number, and adventitious root formation, compared to the control. Random Amplification Polymorphic DNA (RAPD) and Start Codon Targeted (SCoT) analysis revealed genotypic variation, with polymorphism percentages of 39.16% and 34.4%, respectively. Based on 1H and 1H–13C Heteronuclear Single Quantum Coherence (HSQC) Nuclear Magnetic Resonance (NMR) data, thirty-five metabolites were identified. Treatment with nHAp resulted in significant metabolomic changes, characterized by marked alterations in the abundance of primary and secondary metabolites and the enrichment of their biosynthetic pathways. Sucrose served as a key metabolic biomarker, detected exclusively in control samples but depleted in nHAp-treated samples. Conversely, nHAp-treated samples were characterized by the accumulation of phenylalanine, quinic acid, and other cell wall precursors. Trigonelline and catechol concentrations were significantly upregulated with the addition of 40 mg/L nHAp. The highest nHAp concentration (60 mg/L) significantly increased the levels of γ-aminobutyric acid, asparagine, catechol, and cellobiose. Pathway analysis identified significant enrichment, with the aminoacyl-tRNA biosynthesis and ABC transporter pathways being the most significantly enriched.

conclusionThese findings confirm that nHAp treatment enhances vegetative growth parameters and induces both genetic and metabolomic variation in nodal cuttings of Populus alba. The metabolic reprogramming, specifically the shift from sucrose storage to structural carbohydrate and amino acid synthesis, underscores the potential of nHAp as effective nano-elicitors in plant biotechnology.

Indexed as

DurapatiteNanoparticlesPopulusMetabolomeMetabolomicsDurapatiteChemometric analysisHydroxyapatiteMetabolomic analysisNMRPathway analysisRAPDSCoTWhite poplar

Identifiers

PMID41680621
PMCPMC12931081

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.