Evidence map›Paper›PMID 41680619›Full record

ArticleBMC microbiology2026

Genetic diversity, virulence factors and antimicrobial resistance profiles of S. aureus isolated from raw meat, meat products and veterinary samples of food-producing animals in South African provinces.

Abimbola Comfort Atanda, Thendo Mafuna, Frederick Tabit, Itumeleng Matle

Abstract read
In one paragraph

Article in BMC microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Abimbola Comfort AtandaDepartment of Life and Consumer Sciences, University of South Africa, Cnr Christiaan de Wet Road and Pioneer Avenue, Florida, Roodepoort, 1710, South Africa.
Thendo MafunaDepartment of Biochemistry, University of Johannesburg, Auckland Park, South Africa.
Frederick TabitDepartment of Life and Consumer Sciences, University of South Africa, Cnr Christiaan de Wet Road and Pioneer Avenue, Florida, Roodepoort, 1710, South Africa.
Itumeleng MatleDepartment of Agriculture and Animal Health, University of South Africa, Cnr Christiaan de Wet Road and Pioneer Avenue, Florida, Roodepoort, 1710, South Africa. ematlei@unisa.ac.za.

Funding

Gauteng Department of Agriculture and Rural Development Project number P10000152
6 · The paper itself

Abstract

S. aureus is an important pathogen responsible for a wide range of infections in humans and animals. Its pathogenicity arises from diverse virulence factors (VFs), while its ability to acquire resistance to multiple antimicrobial agents further complicates treatment and contributes to its public health significance. The aim of this study was to investigate the presence of VFs, staphylococcal cassette chromosome mec elements (SCCmec) and the antimicrobial resistance profiles of S. aureus isolated from raw meat, meat products, and veterinary samples of food-producing animals, and to assess its genetic diversity. Whole-genome sequencing (WGS) was employed to analyse S. aureus (n = 27) isolates. The WGS-based MLST analysis identified 14 distinct sequence types (STs), with ST30, ST699, ST8 and ST96 being the most prevalent. Spa typing revealed 15 different spa types, including three novel ones: t76, t1029 and t12450, indicating a high genetic diversity. The results further revealed that the isolates harbored a broad spectrum of VFs and associated genes. The SCCmec typing did not identify the mec gene in all our isolates. Tetracycline resistance was widespread, with tet detected in all isolates and tetA (14.81%) and tetK (11.11%) identified in smaller subsets. Additionally, antimicrobial resistance genes such as blaZ (37.04%; 10/27), tet (38) (100%; 27/27), were detected in the isolates. Several ST, spa types and virulence genes identified in this study were linked to infections with high genetic relatedness, indicating the potential risk of S. aureus infections in South Africa.

Indexed as

Genetic VariationMeatMeat ProductsStaphylococcus aureusVirulence FactorsAnimalsAnti-Bacterial AgentsDrug Resistance, BacterialFood MicrobiologyHumansMicrobial Sensitivity TestsMultilocus Sequence TypingSouth AfricaStaphylococcal InfectionsWhole Genome SequencingAnti-Bacterial AgentsVirulence FactorsIdentifyIsolateMultilocus sequence typing (MLST)Resistance genesStaphylococcal protein A (spa)TypeWhole genome sequencing (WGS)

Identifiers

PMID41680619
PMCPMC13088793

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.