Evidence map›Paper›PMID 41680357›Full record

ArticleImmunologic research2026

Rare KDM4C variants and reduced expression underlie epigenetic dysregulation in rheumatoid arthritis.

Deniz Aslar Oner, Hasan Toktas, Umit Dundar, Sevda Adar, Nuran Eyvaz

Abstract read
In one paragraph

Article in Immunologic research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Deniz Aslar OnerAtatürk Vocational School of Health Services, Afyonkarahisar Health Sciences University, Afyonkarahisar, Turkey. deniz.oner@afsu.edu.tr.ORCID http://orcid.org/0000-0002-9515-0073
Hasan ToktasFaculty of Medicine, Department of Physical Therapy and Rehabilitation, Afyonkarahisar Health Sciences University, Afyonkarahisar, Turkey.
Umit DundarFaculty of Medicine, Department of Physical Therapy and Rehabilitation, Afyonkarahisar Health Sciences University, Afyonkarahisar, Turkey.
Sevda AdarFaculty of Medicine, Department of Physical Therapy and Rehabilitation, Afyonkarahisar Health Sciences University, Afyonkarahisar, Turkey.
Nuran EyvazFaculty of Medicine, Department of Physical Therapy and Rehabilitation, Afyonkarahisar Health Sciences University, Afyonkarahisar, Turkey.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aims to investigate structural and expression-level alterations in the histone demethylase KDM4C gene in patients with rheumatoid arthritis (RA) and elucidate its role in the disease's epigenetic basis. KDM4C sequencing was performed in RA patients, and identified variants were mapped to functional domains, including the JmjN and PHD-type2 regions. KDM4C expression was assessed by quantitative PCR in RA and control groups. Molecular findings were analyzed alongside patients' clinical characteristics and treatment histories. A rare missense mutation (c.79 C > T, R27W) located in the JmjN domain was detected in a single patient with RA. In addition, a synonymous variant was identified in the PHD-type2 domain. The R27W variant is predicted by in silico analyses to impair protein homodimerization, while the synonymous change has been hypothesized to influence translational efficiency. Neither variant has previously been linked to RA. KDM4C mRNA expression was significantly reduced in patients with RA. This reduction was particularly evident in individuals with high CRP/ESR levels, positive RF and anti-CCP status, and treatment resistance. Taken together, the molecular and clinical findings suggest a potential functional alteration of KDM4C activity. Specifically, KDM4C may have a reduced capacity to remove repressive methylation marks on histone H3, particularly H3K9me3. These findings suggest that KDM4C dysregulation may promote a closed chromatin conformation in immune cells. This state may lead to silencing of genes involved in immune regulation and increased expression of inflammatory genes, thereby contributing to the pathogenesis of RA. KDM4C appears to be an important epigenetic regulator in RA pathogenesis. The coexistence of structural variants and decreased expression underscores its potential as a diagnostic biomarker and therapeutic target. To our knowledge, this is the first study providing integrated clinical and genetic evidence linking KDM4C dysregulation to RA.

Indexed as

Arthritis, RheumatoidEpigenesis, GeneticJumonji Domain-Containing Histone DemethylasesAdultFemaleGene Expression RegulationGenetic Predisposition to DiseaseHistonesHumansMaleMiddle AgedMutation, MissenseHistonesJumonji Domain-Containing Histone DemethylasesKDM4C protein, humanArthritis, rheumatoidEpigeneticsGene expressionHistone demethylasesKDM4C protein, humanMutation, missense

Identifiers

PMID41680357
PMCPMC12901242

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.