Evidence map›Paper›PMID 41677691›Full record

ArticleBiology2026

A Replication-Competent Flavivirus Genome with a Stable GFP Insertion at the NS1-NS2A Junction.

Pavel Tarlykov, Bakytkali Ingirbay, Dana Auganova, Tolganay Kulatay, Viktoriya Keyer, Sabina Atavliyeva, Maral Zhumabekova, Arman Abeev, Alexandr V Shustov

Abstract read
In one paragraph

Article in Biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Pavel TarlykovNational Center for Biotechnology, Korgalzhin Hwy. 13/5, Astana 010000, Kazakhstan.ORCID 0000-0003-2075-307X
Bakytkali IngirbayNational Center for Biotechnology, Korgalzhin Hwy. 13/5, Astana 010000, Kazakhstan.ORCID 0000-0002-6915-8207
Dana AuganovaNational Center for Biotechnology, Korgalzhin Hwy. 13/5, Astana 010000, Kazakhstan.ORCID 0000-0002-5719-6118
Tolganay KulatayNational Center for Biotechnology, Korgalzhin Hwy. 13/5, Astana 010000, Kazakhstan.ORCID 0009-0004-5885-8963
Viktoriya KeyerNational Center for Biotechnology, Korgalzhin Hwy. 13/5, Astana 010000, Kazakhstan.ORCID 0000-0001-8885-2387
Sabina AtavliyevaNational Center for Biotechnology, Korgalzhin Hwy. 13/5, Astana 010000, Kazakhstan.ORCID 0000-0002-7565-9454
Maral ZhumabekovaNational Center for Biotechnology, Korgalzhin Hwy. 13/5, Astana 010000, Kazakhstan.ORCID 0009-0002-9532-6232
Arman AbeevNational Center for Biotechnology, Korgalzhin Hwy. 13/5, Astana 010000, Kazakhstan.ORCID 0009-0005-3594-425X
Alexandr V ShustovNational Center for Biotechnology, Korgalzhin Hwy. 13/5, Astana 010000, Kazakhstan.ORCID 0000-0001-9880-9382

Funding

Ministry of Healthcare of the Republic of Kazakhstan BR25293293Science Committee of the Ministry of Science and Higher Education of the Republic of Kazakhstan AP23488393
6 · The paper itself

Abstract

The flavivirus NS1 protein is a component of the viral replication complex and plays diverse, yet poorly understood, roles in the viral life cycle. To enable real-time visualization of the developing replication organelle and biochemical analysis of tagged NS1 and its interacting partners, we engineered a replication-competent yellow fever virus (YFV) replicon encoding a C-terminal fusion of NS1 with green fluorescent protein (NS1-GFP). The initial variant was non-viable in the absence of trans-complementation with wild-type NS1; however, viability was partially restored through the introduction of co-adaptive mutations in GFP (Q204R/A206V) and NS4A (M108L). Subsequent cell culture adaptation generated a 17-nucleotide frameshift within the NS1-GFP linker, resulting in a more flexible and less hydrophobic linker sequence. The optimized genome, in the form of a replicon, replicates in packaging cells that produce YFV structural proteins, as well as in naive BHK-21 cells. In the packaging cells, the adapted NS1-GFP replicon produces titers of infectious particles of approximately 10

Indexed as

adaptive mutationsflavivirusNS1-GFP fusion proteinNS1-NS2A processingNS1 proteinreplication complexyellow fever virus

Identifiers

PMID41677691
PMCPMC12896631

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.