Evidence map›Paper›PMID 41676517›Full record

ArticlebioRxiv : the preprint server for biology2026

Physics-Informed Neural Network for Mapping Vascular and Tissue Dynamics Using Laser Speckle Contrast Imaging.

Shuying Li, Rockwell Tang, Victoria Krepulec, Will Donovan, David Boas, Xiaojun Cheng, Lei Tian

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shuying LiDepartment of Chemical, Paper, and Biomedical Engineering, Miami University - Oxford, Oxford, OH 45056, USA.ORCID 0000-0003-3253-6304
Rockwell TangNeurophotonics Center, Boston University, Boston, MA 02215, USA.ORCID 0000-0003-3044-0085
Victoria KrepulecDepartment of Chemical, Paper, and Biomedical Engineering, Miami University - Oxford, Oxford, OH 45056, USA.
Will DonovanDepartment of Chemical, Paper, and Biomedical Engineering, Miami University - Oxford, Oxford, OH 45056, USA.
David BoasNeurophotonics Center, Boston University, Boston, MA 02215, USA.ORCID 0000-0002-6709-7711
Xiaojun ChengNeurophotonics Center, Boston University, Boston, MA 02215, USA.ORCID 0000-0002-3568-0603
Lei TianDepartment of Biomedical Engineering, Boston University, Boston, MA 02215, USA.ORCID 0000-0002-1316-4456

Funding

Neurophotonic Advances for Mechanistic Investigation of the Role of Capillary Dysfunction in Stroke RecoveryR01NS127156 · NINDS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI David A Boas · 2022 to 2026
$3.3M
Mesoscopic microscopy for ultra-high speed and large-scale volumetric brain imagingR01EB034272 · NIBIB · JOHNS HOPKINS UNIVERSITY · PI Ji Yi · 2023 to 2026
$1.9M
NIBIB NIH HHS R01 EB034272NINDS NIH HHS R01 NS127156
6 · The paper itself

Abstract

Significance: Quantitatively mapping both cerebral blood flow and tissue dynamics from laser speckle contrast imaging (LSCI) is powerful for studying cerebral blood flow in general and neural-vascular coupling and stroke in particular. Conventional multi-exposure fitting is slow and difficult to scale. Efficient, physically grounded methods are needed to extract both vascular and tissue dynamic biomarkers from LSCI data. Aim: To develop and validate a physics-informed neural network (PINN) that quantitatively estimates fast (vascular) and slow (tissue-related) speckle decorrelation parameters directly from LSCI measurements without requiring ground-truth labels. Approach: We developed a physics-informed neural network (PINN) to estimate fast (vascular) and slow (tissue-related) speckle decorrelation parameters directly from multi-exposure LSCI data without requiring ground-truth labels. The analytical LSCI model is embedded in the network loss function, enforcing consistency with speckle physics during training. The model operates in a self-supervised manner and performs pixel-wise inference across full-field images. The framework was evaluated using in vivo mouse stroke LSCI datasets. Results: The PINN accurately recovered fast decorrelation rates associated with cerebral blood flow and slower dynamics linked to tissue and cellular motion. The parameter maps closely match those from traditional nonlinear fitting, but at orders-of-magnitude higher speed, reducing analysis from several hours to two seconds per image. It also generalizes to unseen subjects and remains robust under noise. Conclusions: Our approach establishes physics-informed learning as a practical framework for near real-time extraction of vascular and cellular biomarkers from LSCI, enabling longitudinal monitoring of stroke progression and potentially facilitating clinical translation.

Indexed as

cerebral blood flowLaser speckle contrast imagingneurovascular imagingphysics-informed neural networksself-supervised learningstroke

Identifiers

PMID41676517
PMCPMC12889527

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.