Evidence map›Paper›PMID 41676451›Full record

ArticleiMetaOmics2025

BioMGCore: A toolkit for detection of biological metabolites in microbiome.

Guang Yang, Guohao Yu, Qian Cui, Xueping Huang, Kexin Guo, Shulei Jia

Abstract readLetter
PubMed Full text at PMC Publisher
In one paragraph

Article in iMetaOmics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Genomic insights and survival dynamics ofFrontiers in microbiology · 2026
    Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Guang YangJiangsu Key Laboratory of Marine Bioresources and Environment, School of Ocean Food and Biological Engineering, Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Marine Resources Development Research Institute Jiangsu Ocean University Lianyungang China.
Guohao YuJiangsu Key Laboratory of Marine Bioresources and Environment, School of Ocean Food and Biological Engineering, Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Marine Resources Development Research Institute Jiangsu Ocean University Lianyungang China.
Qian CuiJiangsu Key Laboratory of Marine Bioresources and Environment, School of Ocean Food and Biological Engineering, Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Marine Resources Development Research Institute Jiangsu Ocean University Lianyungang China.
Xueping HuangJiangsu Key Laboratory of Marine Bioresources and Environment, School of Ocean Food and Biological Engineering, Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Marine Resources Development Research Institute Jiangsu Ocean University Lianyungang China.
Kexin GuoJiangsu Key Laboratory of Marine Bioresources and Environment, School of Ocean Food and Biological Engineering, Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Marine Resources Development Research Institute Jiangsu Ocean University Lianyungang China.
Shulei JiaSchool of Basic Medical Sciences Tianjin Medical University Tianjin China.ORCID https://orcid.org/0000-0003-2483-0300

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The keyword matching and gene proximity principles were used to accurately identify core gene clusters in microbial genomes. The metabolic gene clusters can be classified into different taxonomic groups according to Domain, Phylum, Class, Order, Family, Genus, and Species. BioMGCore can achieve batch statistics for secondary metabolites prediction.

Identifiers

PMID41676451
PMCPMC12806098

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.