Evidence map›Paper›PMID 41675550›Full record

ArticleiMetaOmics2024

A super pan-genome map provides genomic insights into evolution of diploid cotton species.

Xueqiang Wang, Hejun Lu, Yan Zhao, Zhiyuan Zhang, Jun Li, Zeyu Dong, Yupeng Hao, Lei Fang, Xueying Guan, Ting Zhao and 2 more

Abstract readLetter
PubMed Full text at PMC Publisher
In one paragraph

Article in iMetaOmics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Unlocking the future of crop improvement with crop wild relatives.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Xueqiang WangZhejiang Provincial Key Laboratory of Crop Genetic Resources The Advanced Seed Institute, Plant Precision Breeding Academy, College of Agriculture and Biotechnology Zhejiang University Hangzhou Zhejiang China.ORCID 0000-0001-5593-5223
Hejun LuZhejiang Provincial Key Laboratory of Crop Genetic Resources The Advanced Seed Institute, Plant Precision Breeding Academy, College of Agriculture and Biotechnology Zhejiang University Hangzhou Zhejiang China.
Yan ZhaoState Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology College of Agronomy Shandong Agricultural University Tai'an Shandong China.
Zhiyuan ZhangCotton and Economic Crops Precision Breeding & Germplasm Innovation Team Hainan Institute of Zhejiang University Sanya Hainan China.
Jun LiZhejiang Provincial Key Laboratory of Crop Genetic Resources The Advanced Seed Institute, Plant Precision Breeding Academy, College of Agriculture and Biotechnology Zhejiang University Hangzhou Zhejiang China.
Zeyu DongZhejiang Provincial Key Laboratory of Crop Genetic Resources The Advanced Seed Institute, Plant Precision Breeding Academy, College of Agriculture and Biotechnology Zhejiang University Hangzhou Zhejiang China.
Yupeng HaoZhejiang Provincial Key Laboratory of Crop Genetic Resources The Advanced Seed Institute, Plant Precision Breeding Academy, College of Agriculture and Biotechnology Zhejiang University Hangzhou Zhejiang China.
Lei FangZhejiang Provincial Key Laboratory of Crop Genetic Resources The Advanced Seed Institute, Plant Precision Breeding Academy, College of Agriculture and Biotechnology Zhejiang University Hangzhou Zhejiang China.
Xueying GuanZhejiang Provincial Key Laboratory of Crop Genetic Resources The Advanced Seed Institute, Plant Precision Breeding Academy, College of Agriculture and Biotechnology Zhejiang University Hangzhou Zhejiang China.
Ting ZhaoZhejiang Provincial Key Laboratory of Crop Genetic Resources The Advanced Seed Institute, Plant Precision Breeding Academy, College of Agriculture and Biotechnology Zhejiang University Hangzhou Zhejiang China.
Yan HuZhejiang Provincial Key Laboratory of Crop Genetic Resources The Advanced Seed Institute, Plant Precision Breeding Academy, College of Agriculture and Biotechnology Zhejiang University Hangzhou Zhejiang China.
Tianzhen ZhangZhejiang Provincial Key Laboratory of Crop Genetic Resources The Advanced Seed Institute, Plant Precision Breeding Academy, College of Agriculture and Biotechnology Zhejiang University Hangzhou Zhejiang China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A high-quality super pan-genome was built using 22 representative diploid cottons species. Adaptive evolution among extant Gossypium species was investigated. Specific genes were enriched for different terms, revealing variations in characteristics of different cotton species. The 321 hotspot regions of structural variations (SVs), containing 90 genes associated with fiber initiation and/or elongation, were detected. A 444-bp deletion in the promoter sequence of

Identifiers

PMID41675550
PMCPMC12806262

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.