Evidence map›Paper›PMID 41675136›Full record

ArticleBiophysica2025

Cytoskeletal Prestress Regulates RIG-I-Mediated Innate Immunity.

Arpan Roy, Sydney Sarver, Jarod Beights, Sean Brennan, Sazid Noor Rabi, Sakib Mohammad, Kyu Young Han, Sabrina Nilufar, Farhan Chowdhury

Abstract read
In one paragraph

Article in Biophysica, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Arpan RoySchool of Mechanical, Aerospace, and Materials Engineering, Southern Illinois University Carbondale, Carbondale, IL 62901, USA.
Sydney SarverSchool of Mechanical, Aerospace, and Materials Engineering, Southern Illinois University Carbondale, Carbondale, IL 62901, USA.
Jarod BeightsSchool of Mechanical, Aerospace, and Materials Engineering, Southern Illinois University Carbondale, National Science Foundation Research Experience for Undergraduate Program, Southern Illinois University Carbondale, Carbondale, IL 62901, USA.
Sean BrennanSchool of Mechanical, Aerospace, and Materials Engineering, Southern Illinois University Carbondale, National Science Foundation Research Experience for Undergraduate Program, Southern Illinois University Carbondale, Carbondale, IL 62901, USA.
Sazid Noor RabiSchool of Mechanical, Aerospace, and Materials Engineering, Southern Illinois University Carbondale, Carbondale, IL 62901, USA.
Sakib MohammadSchool of Electrical, Computer, and Biomedical Engineering, Southern Illinois University Carbondale, Carbondale, IL 62901, USA.
Kyu Young HanCREOL, The College of Optics and Photonics, University of Central Florida, Orlando, FL 32816, USA.
Sabrina NilufarSchool of Mechanical, Aerospace, and Materials Engineering, Southern Illinois University Carbondale, Carbondale, IL 62901, USA.
Farhan ChowdhurySchool of Mechanical, Aerospace, and Materials Engineering, Southern Illinois University Carbondale, Carbondale, IL 62901, USA.

Funding

Single-molecule approaches to study epiblast stem cell fate decisionR15GM140448 · NIGMS · SOUTHERN ILLINOIS UNIVERSITY CARBONDALE · PI Farhan H Chowdhury · 2021 to 2026
$1.1M
NIGMS NIH HHS R15 GM140448
6 · The paper itself

Abstract

Innate immunity is the body's first line of defense for mounting robust antiviral signaling. However, the role of cytoskeletal prestress, a hallmark of cellular mechanotransduction, in regulating innate immune pathways such as retinoic acid-inducible gene I (RIG-I) signaling remains poorly understood. Herein, we show that cells on soft vs. rigid substrates elicit cytoskeletal prestress-dependent activation of RIG-I signaling, leading to differential type-I interferon (IFN) gene expression. Cells were cultured on soft (0.6 kPa) and stiff (8.5 kPa) substrates to modulate cellular traction and prestress, followed by transfection of Poly(I:C), a synthetic viral dsRNA mimic, to measure the RIG-I-mediated innate immune response. Cells on soft substrates show minimal activation of RIG-I signaling, resulting in low expression of IFN-β1 and other IFN-stimulated genes (ISGs), compared to cells on stiff substrates. We further demonstrate that activation of TANK Binding Kinase 1 (TBK1), a downstream effector of the RIG-I pathway, is inhibited in cells on soft substrates due to the cytoplasmic sequestration of the Yes-associated protein (YAP), a HIPPO pathway effector protein. In contrast, cells on stiffer substrates experienced decreased TBK1 inhibition due to the nuclear localization of YAP and exhibited elevated TBK1 activation and heightened IFN and ISG expressions. Together, we demonstrate that cytoskeletal prestress represents a key biophysical regulator of innate immune signaling.

Indexed as

cytoskeletal prestressRIG-ITBK1tractionYAP

Identifiers

PMID41675136
PMCPMC12889820

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.