Evidence map›Paper›PMID 41673742›Full record

ArticleBiology of sex differences2026

A hypomorphic SRD5A2 haplotype with a potential founder effect: composed of common variants in individuals with 5α-reductase type 2 deficiency from South China.

Xiaoyun Lei, Xu Zhou, Zifeng Cheng, Sen Zhao, Chunrong Gui, Yunting Ma, Meizhen Shi, Xianda Wei, Bobo Xie, Xin Fan and 5 more

Abstract read
In one paragraph

Article in Biology of sex differences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

15 authors.

Xiaoyun Lei *Center for Medical Genetics and Genomics, The Second Affiliated Hospital of Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Xu Zhou *The Second School of Medicine, Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Zifeng Cheng *The Second School of Medicine, Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Sen ZhaoPeking Union Medical College Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 1 Shuaifuyuan, Beijing, 100730, China.
Chunrong GuiCenter for Medical Genetics and Genomics, The Second Affiliated Hospital of Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Yunting MaThe Second School of Medicine, Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Meizhen ShiCenter for Medical Genetics and Genomics, The Second Affiliated Hospital of Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Xianda WeiCenter for Medical Genetics and Genomics, The Second Affiliated Hospital of Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Bobo XieCenter for Medical Genetics and Genomics, The Second Affiliated Hospital of Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Xin FanThe Guangxi Health Commission Key Laboratory of Medical Genetics and Genomics, The Second Affiliated Hospital of Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Shaoke ChenThe Guangxi Health Commission Key Laboratory of Medical Genetics and Genomics, The Second Affiliated Hospital of Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Qiuxing TaoThe Second School of Medicine, Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Yuna SuThe Second School of Medicine, Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China.
Dejian YuanDepartment of Medical Genetics, Liuzhou Hospital of Guangzhou Women and Children's Medical Center, No. 50, Boyuan Avenue, Yufeng District, Liuzhou, 545616, Guangxi Zhuang Autonomous Region, China. yuandejian@163.com.
Baoheng GuiCenter for Medical Genetics and Genomics, The Second Affiliated Hospital of Guangxi Medical University, No. 166, Daxuedong Road, Xixiangtang District, Nanning, 530007, Guangxi Zhuang Autonomous Region, China. BaohengGui@yeah.net.

Funding

National Natural Science Foundation of China 82001531the Initial Scientific Research Fund for Advanced Talents from the Second Affiliated Hospital of Guangxi Medical University 2019112the Joint Project on Regional High-Incidence Diseases Research of Guangxi Natural Science Foundation 2024GXNSFBA010447the National High Level Hospital Clinical Research Funding 2022-PUMCH-C-033the special Scientific Research Fund of Guangxi Ten-Hundred-Thousand Talents Project 2021186
6 · The paper itself

Abstract

backgroundDisorders of sex development (DSDs) exhibit high genetic and phenotypic heterogeneity, and genotype-phenotype correlations are not fully understood. 5α-Reductase type 2 (5α-RD2) deficiency, a common form of DSD, is caused by SRD5A2 inactivation. This study investigated the role of SRD5A2 haplotypes in DSD, focusing on their corresponding phenotypes, structural changes and impacts on enzyme activity.

methodsThis study enrolled 216 individuals with DSD who underwent genetic analysis and 2,794 controls. Linkage disequilibrium analysis was performed in individuals with 5α-RD2 deficiency to identify SRD5A2 haplotypes, and haplotype frequencies were analysed across cohorts. The clinical manifestations of individuals with different SRD5A2 haplotypes were characterized. Structural predictions were employed to investigate the impacts of haplotypes on the 5α-RD2 structure and interactions with ligands. Functionally, kinetic assays were conducted to validate the effects of different haplotypes on enzyme activity.

resultsA SRD5A2 haplotype composed of c.265C > G and c.680G > A (Hap3: G-A) was identified, and the haplotype frequency was 64.71% in individuals with 5α-RD2 deficiency, 2.59% and 1.22% in non-5α-RD2 deficiency DSD cases without or with known DSD-related gene variants, respectively, and 1.57% in in-house controls. Globally, Hap3: G-A was enriched in southern Chinese individuals and showed high population differentiation, indicating a potential founder effect of the haplotype. The majority of homozygotes of Hap3: G-A presented microphallus, and nearly half of them manifested isolated microphallus. Structurally, Hap3: G-A was predicted to result in an increase in the solvent-accessible surface area (10.72 Å

conclusionsHap3: G-A, which is prevalent in individuals with 5α-RD2 deficiency, suggests a potential founder effect. Structurally, compared with other haplotypes, Hap3: G-A seems to have a combined effect on the structure and interaction of 5α-RD2, rather than have merely additive effects of its constituent variants. Functionally, kinetic assays suggested a hypomorphic effect of Hap3: G-A. These findings provide valuable insights for understanding genotype-phenotype correlations, genetic counselling, early intervention and clinical management of individuals with 5α-RD2 deficiency or even other DSDs.

Indexed as

3-Oxo-5-alpha-Steroid 4-DehydrogenaseFounder EffectHaplotypesHypospadiasMembrane ProteinsChinaFemaleHumansLinkage DisequilibriumMale3-Oxo-5-alpha-Steroid 4-DehydrogenaseMembrane ProteinsSRD5A2 protein, human5α-Reductase type 2 deficiencyDisorders of sex developmentFounder effectHypomorphic haplotypeSouth ChinaSRD5A2

Identifiers

PMID41673742
PMCPMC12998017

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