ArticleScientific data2026
A phased, near-telomere-to-telomere chromosome-scale reference genome of the Moroccan argan tree.
Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
0 citing papers in PubMed.
No citing paper in PubMed yet.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The argan tree (Argania spinosa), endemic to Morocco, holds major ecological and economic value. We generated a high-quality, chromosome-scale, phased reference genome using PacBio HiFi long reads and Hi-C scaffolding. The assembly resolves two haplotypes, each organized into 11 pseudochromosomes (2n = 22). Haplotype-1 spans 621 Mb (scaffold N50 = 50 Mb; GC = 33.79%), and Haplotype-2 spans 615 Mb (scaffold N50 = 51 Mb; GC = 33.77%). BUSCO completeness is 97.8% for Hap1 and 98.1% for Hap2, with Merqury QV values of 75 for both, indicating high consensus accuracy and strong phasing. Telomeric repeats (AAACCCT)n appear at both ends of most chromosomes, and only small terminal gaps remain, so we conservatively classify the assemblies as near-T2T. We annotated 35,183 gene loci producing 39,805 mRNA isoforms and 410 tRNA genes, with 76.46% of loci functionally characterized. Repeats represent 61.65% of the genome, dominated by LTR retrotransposons. All raw data, assemblies, and annotations are publicly accessible, providing a robust genomic foundation for conservation genetics, breeding, and evolutionary studies in A. spinosa.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.