Evidence map›Paper›PMID 41672512›Full record

ReviewProceedings of the Japan Academy. Series B, Physical and biological sciences2026

BRD9 at the crossroads of splicing, chromatin remodeling, and hematopoiesis.

Takaya Yamasaki, Koutarou Nishimura, Daichi Inoue

Abstract readReview
In one paragraph

Review in Proceedings of the Japan Academy. Series B, Physical and biological sciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Takaya YamasakiDepartment of Cancer Pathology, Graduate School of Medicine and Frontier Biosciences, The University of Osaka.ORCID http://orcid.org/0009-0000-8012-7615
Koutarou NishimuraDepartment of Cancer Pathology, Graduate School of Medicine and Frontier Biosciences, The University of Osaka.
Daichi InoueDepartment of Cancer Pathology, Graduate School of Medicine and Frontier Biosciences, The University of Osaka.ORCID http://orcid.org/0000-0002-7947-6540

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BAF complexes are ATP-dependent chromatin remodelers that govern gene expression and cellular identity. The non-canonical BAF (ncBAF) complex, with BRD9 as its signature component, orchestrates chromatin remodeling essential for balanced hematopoiesis. BRD9 loss disrupts enhancer-promoter interactions and CTCF-mediated chromatin architecture, causing myeloid skewing, impaired lymphoid differentiation, and diminished hematopoietic stem cell (HSC) fitness-phenotypes recapitulating physiological aging. This mechanism underlies aging-related pathologies such as myelodysplastic syndromes (MDS), in which spliceosomal mutations in SF3B1 trigger aberrant BRD9 splicing and destabilize its mRNA. Remarkably, BRD9 exhibits context-dependent functions: its depletion consistently promotes differentiation and apoptosis in myeloid leukemias, contrasting its differential roles in myeloid differentiation in adult versus fetal hematopoiesis. Thus, BRD9 mechanistically links spliceosomal dysfunction to chromatin dysregulation, bridging aging-associated disease and malignant transformation through context-dependent roles. Among the diverse assemblies of BAF family, these findings position the BRD9-ncBAF axis as both a critical determinant of hematopoietic fate decisions and a promising therapeutic target in hematologic malignancies.

Indexed as

Chromatin Assembly and DisassemblyHematopoiesisRNA SplicingTranscription FactorsAnimalsBromodomain Containing ProteinsHematopoietic Stem CellsHumansBRD9 protein, humanBromodomain Containing ProteinsTranscription FactorsBAF complexBRD9chromatin remodelingdifferentiationhematopoietic stem cell (HSC)RNA splicing

Identifiers

PMID41672512
PMCPMC13000111

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.