Evidence map›Paper›PMID 41669100›Full record

ArticleProceedings of the Platform for Advanced Scientific Computing Conference2025

In-Silico Predictions of Drug Resistance in Lung Cancers With EGFR Mutation.

Ibrahim Imam, Usman L Abbas, Christian M Gosser, Christine F Brainson, Wibe de Jong, Xiaoqi Liu, Hunter N B Moseley, Shao Qing, Shulin Zhang, Ralph Zinner and 1 more

Abstract read
In one paragraph

Article in Proceedings of the Platform for Advanced Scientific Computing Conference, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Ibrahim ImamChemical and Materials Engineering, University of Kentucky, Lexington, KY, USA.
Usman L AbbasChemical and Materials Engineering, University of Kentucky, Lexington, KY, USA.
Christian M GosserToxicology and Cancer Biology, University of Kentucky, Lexington, KY, USA.
Christine F BrainsonToxicology and Cancer Biology, University of Kentucky, Lexington, KY, USA.
Wibe de JongComputational Science Department, Lawrence Berkeley National, Laboratory, Berkeley, CA, USA.
Xiaoqi LiuToxicology and Cancer Biology, University of Kentucky, Lexington, KY, USA.
Hunter N B MoseleyDepartment of Molecular and Cellular, Biochemistry, University of Kentucky, Lexington, KY, USA.
Shao QingChemical and Materials Engineering, University of Kentucky, Lexington, KY, USA.
Shulin ZhangPathology and Laboratory Medicine, University of Kentucky, Lexington, KY, USA.
Ralph ZinnerDivision of Medical Oncology, University of Kentucky, Lexington, KY, USA.
Sally R EllingsonDivision of Biomedical Informatics, University of Kentucky, Lexington, KY, USA.

Funding

University of Kentucky Markey Cancer Center Support Grant ECIA SupplementP30CA177558 · NCI · UNIVERSITY OF KENTUCKY · PI Jennifer F Rogers · 2013 to 2026
$38.3M
NCI NIH HHS P30 CA177558
6 · The paper itself

Abstract

Cancer treatment is often hindered by the emergence of drug resistance, frequently driven by novel mutations in oncogenes or drug-targeted pathways. Predicting resistance mechanisms is critical for informing therapeutic strategies and improving patient outcomes. Here, we present a computational workflow that leverages high-performance computing (HPC) resources to systematically evaluate the impact of emerging mutations on drug efficacy. Our workflow integrates deep learning structure prediction, molecular dynamics simulations, molecular docking, and binding predictions of known compounds to predict resistance mechanisms and propose alternative therapeutic options. We also explore quantum chemical calculations as a tool to complement experimental validations to better understand the binding preferences between different protein forms.

Indexed as

Applied computing → Life and medical sciencescomputational approaches in cancercomputational drug discoveryComputing methodologies → Modeling and simulationdrug resistancehigh-performance computing

Identifiers

PMID41669100
PMCPMC12885125

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.