Evidence map›Paper›PMID 41668066›Full record

ReviewGenome biology2026

Many roads lead to a plant cistrome: mapping and interpreting transcription factor binding in plants.

Moonia Ammari, Aanchal Choudhary, Mark Zander

Abstract readReview
In one paragraph

Review in Genome biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Genome-Wide Identification of the CaPlants (Basel, Switzerland) · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Moonia Ammari *Department of Plant Biology, Rutgers, Waksman Institute of Microbiology, The State University of New Jersey, Piscataway, NJ, 08854, USA.
Aanchal Choudhary *Department of Plant Biology, Rutgers, Waksman Institute of Microbiology, The State University of New Jersey, Piscataway, NJ, 08854, USA.
Mark ZanderDepartment of Plant Biology, Rutgers, Waksman Institute of Microbiology, The State University of New Jersey, Piscataway, NJ, 08854, USA. mzander@waksman.rutgers.edu.

Funding

Directorate for Biological Sciences IOS-2339927
6 · The paper itself

Abstract

Elucidating transcription factor (TF) function is essential for advancing our understanding and manipulation of the mechanisms that orchestrate gene expression programs underlying plant growth, development, and resilience. Defining the genomic binding sites of a TF-its cistrome-is particularly critical, as it reveals where TF activity can occur and, when integrated with gene expression and chromatin landscape data, delineates the full scope of TF function. In this review, we highlight the biological factors that shape plant cistromes and, importantly, the potential alterations in cistrome composition that may arise during experimental mapping. We further emphasize recent methodological advances now available to the plant science community and outline future directions for the emerging field of plant cistromics.

Indexed as

Genome, PlantPlant ProteinsPlantsTranscription FactorsBinding SitesChromatinChromosome MappingGene Expression Regulation, PlantProtein BindingChromatinPlant ProteinsTranscription Factors

Identifiers

PMID41668066
PMCPMC12990482

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.