Evidence map›Paper›PMID 41660079›Full record

ArticlePeerJ2026

Whole-genome and pangenome insights into

Chutinthorn Oungbamnet, Yothin Hinwan, Nut Nithimongkolchai, Vorthon Sawaswong, Suwalak Chitcharoen, Kiatichai Faksri, Auttawit Sirichoat

Abstract read
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In one paragraph

Article in PeerJ, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chutinthorn OungbamnetDepartment of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
Yothin HinwanDepartment of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
Nut NithimongkolchaiDepartment of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
Vorthon SawaswongDepartment of Biochemistry, Faculty of Science, Mahidol University, Bangkok, Thailand.
Suwalak ChitcharoenDepartment of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.ORCID 0000-0002-9110-6884
Kiatichai FaksriDepartment of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
Auttawit SirichoatDepartment of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.ORCID 0000-0001-7681-4295

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Nontuberculous mycobacteria are opportunistic pathogens which cause infections in various tissues, with the Methods: This study investigated the drug susceptibility profiles and performed whole-genome sequencing of 12 clinical Results: Based on minimum inhibitory concentration values, moxifloxacin resistance was most prevalent (100%), followed by linezolid (90%), clarithromycin (30%), and amikacin (30%). The presence of antibiotic resistance genes and virulence factors, including ESX secretion systems and efflux pumps, highlights the bacterium's potential for immune evasion and survival under stress. Single nucleotide polymorphism-based phylogenetic analysis revealed a close genetic relatedness between the isolates. Pangenome analysis of 16 Conclusions: This study provides valuable insight into the genomic diversity, antimicrobial resistance profiles, and virulence potential of

Indexed as

Genome, BacterialMycobacterium avium ComplexAnti-Bacterial AgentsDrug Resistance, BacterialGenetic VariationHumansMicrobial Sensitivity TestsPhylogenyPolymorphism, Single NucleotideThailandVirulence FactorsWhole Genome SequencingAnti-Bacterial AgentsVirulence FactorsAntimicrobial resistanceGenetic diversityMycobacterium colombiensePangenome analysisVirulence factors

Identifiers

PMID41660079
PMCPMC12875251

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.