Evidence map›Paper›PMID 41656197›Full record

ArticleBMC genomics2026

Genome-wide reconstruction of the intrinsic apoptosis pathway in Haemonchus contortus.

Yanxiang Shen, Neil D Young, Jiangning Song, Brad E Sleebs, Bill C H Chang, Erinna F Lee, Walter D Fairlie, Robin B Gasser

Abstract read
In one paragraph

Article in BMC genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yanxiang ShenDepartment of Veterinary Biosciences, Melbourne Veterinary School, The University of Melbourne, Parkville, VIC, Australia.
Neil D YoungDepartment of Veterinary Biosciences, Melbourne Veterinary School, The University of Melbourne, Parkville, VIC, Australia.
Jiangning SongBiomedicine Discovery Institute, Department of Biochemistry and Molecular Biology, Monash University, Melbourne, VIC, Australia.
Brad E SleebsDepartment of Veterinary Biosciences, Melbourne Veterinary School, The University of Melbourne, Parkville, VIC, Australia.
Bill C H ChangDepartment of Veterinary Biosciences, Melbourne Veterinary School, The University of Melbourne, Parkville, VIC, Australia.
Erinna F LeeDepartment of Biochemistry and Chemistry, School of Agriculture, Biomedicine and Environment, La Trobe University, Bundoora, VIC, Australia.
Walter D FairlieDepartment of Biochemistry and Chemistry, School of Agriculture, Biomedicine and Environment, La Trobe University, Bundoora, VIC, Australia.
Robin B GasserDepartment of Veterinary Biosciences, Melbourne Veterinary School, The University of Melbourne, Parkville, VIC, Australia. robinbg@unimelb.edu.au.

Funding

Australian Research Council FT230100559Australian Research Council LP220200614
6 · The paper itself

Abstract

backgroundProgrammed cell death (or apoptosis) is a fundamental process in metazoans, extensively characterised in mammals and other vertebrates but much less so in invertebrates beyond the free-living nematode Caenorhabditis elegans and the vinegar fly - Drosophila melanogaster. Here, we present the first reconstruction of the complete intrinsic apoptosis pathway in the parasitic nematode Haemonchus contortus, a blood-feeding pathogen of ruminants and a major cause of global production losses.

resultsUsing C. elegans proteins as references, we combined genome-wide homology searches, structural modelling, and developmental transcriptomic and proteomic analysis to identify and characterise apoptosis regulators in H. contortus. Homologues of all canonical C. elegans components were found, including CEP-1, EGL-1, CED-9, CED-4 and CED-3, together with modulators such as DRE-1 and PUF-8. Structural models revealed conservation of the CED-9:CED-4 and CED-4:CED-3 complexes, while EGL-1 and CEP-1 retained key structural domains despite significant sequence divergence. Transcriptomic data showed that the genes Hc-ced-9 and Hc-ced-3 are constitutively expressed across developmental stages, whereas Hc-cep-1 and Hc-egl-1 display stage-specific transcription. Proteomic data confirmed the presence of Hc-CED-9, Hc-CED-4 and Hc-CED-3 in at least one developmental stage, while Hc-EGL-1 and Hc-DRE-1 were not detected. Discordances between RNA and protein profiles, particularly for Hc-EGL-1, suggest tight post-transcriptional control. These findings demonstrate that, while the core architecture of apoptosis is conserved in H. contortus, regulatory divergence has occurred, reflecting lineage-specific adaptations.

conclusionThis molecular framework highlights conserved structural features and developmental regulation of apoptosis in a parasitic nematode and provides a basis for functional studies to evaluate apoptotic regulators as potential targets for anthelmintic development.

Indexed as

ApoptosisGenome, HelminthHaemonchusAnimalsGene Expression ProfilingHelminth ProteinsPhylogenyProteomicsTranscriptomeHelminth ProteinsApoptosisHaemonchus contortusIntrinsic pathwayNematodePost-transcriptional regulationStructural modelling

Identifiers

PMID41656197
PMCPMC12983753

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.