Evidence map›Paper›PMID 41651886›Full record

ArticleScientific data2026

Establishing dermatopathology encyclopedia DermpathNet with Artificial Intelligence-Based Workflow.

Ziyang Xu, Mingquan Lin, Yiliang Zhou, Zihan Xu, Seth J Orlow, Shane A Meehan, Alexandra Flamm, Ata S Moshiri, Yifan Peng

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ziyang Xu *Perelman Department of Dermatology, NYU Grossman School of Medicine, New York, USA.
Mingquan Lin *Department of Population Health Sciences, Weill Cornell Medicine, New York, USA.
Yiliang ZhouDepartment of Population Health Sciences, Weill Cornell Medicine, New York, USA.ORCID http://orcid.org/0009-0002-7457-7075
Zihan XuDepartment of Population Health Sciences, Weill Cornell Medicine, New York, USA.
Seth J OrlowDivision of Dermatopathology, Mount Sinai Health, New York, USA.
Shane A MeehanDivision of Dermatopathology, Mount Sinai Health, New York, USA.
Alexandra FlammPerelman Department of Dermatology, NYU Grossman School of Medicine, New York, USA. alexandra.flamm@nyulangone.org.
Ata S MoshiriPerelman Department of Dermatology, NYU Grossman School of Medicine, New York, USA. yip4002@med.cornell.edu.ORCID http://orcid.org/0000-0001-6684-4503
Yifan PengDepartment of Population Health Sciences, Weill Cornell Medicine, New York, USA. Ata.Moshiri@nyulangone.org.ORCID http://orcid.org/0000-0001-9309-8331

Funding

National Science Foundation (NSF) 2145640
6 · The paper itself

Abstract

Accessing high-quality, open-access dermatopathology image datasets for learning and cross-referencing is a common challenge for clinicians and trainees. To establish a comprehensive open-access dermatopathology dataset for educational, cross-referencing, and machine-learning purposes, we employed a hybrid workflow to curate and categorize images from the PubMed Central (PMC) repository. We used specific keywords to extract relevant images, and classified them using a novel hybrid method that combined deep learning-based image modality classification with figure caption analyses. Validation on 651 manually annotated images demonstrated the robustness of our workflow, with an F-score of 89.6% for the deep learning approach, 61.0% for the keyword-based retrieval method, and 90.4% for the hybrid approach. We retrieved over 7,772 images across 166 diagnoses and released this fully annotated dataset, reviewed by board-certified dermatopathologists. Using our dataset as a challenging task, we found the current image analysis algorithm from OpenAI inadequate for analyzing dermatopathology images. In conclusion, we have developed a large, peer-reviewed, open-access dermatopathology image dataset, DermpathNet, which features a semi-automated curation workflow.

Indexed as

Artificial IntelligenceDermatologySkin DiseasesWorkflowData CurationDeep LearningHumansImage Processing, Computer-Assisted

Identifiers

PMID41651886
PMCPMC12987945

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.