Evidence map›Paper›PMID 41651467›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2026

Optimized primary organotypic culture from murine neonatal tracheal airway epithelial cells.

Yan Han, Rewa Kulkarni, Stephan Pribitzer, Steven F Ziegler, Jason S Debley, Laurie C Eldredge

Abstract read
In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yan HanCenter for Respiratory Biology and Therapeutics, Seattle Children's Research Institute, Seattle, Washington, United States.
Rewa KulkarniDepartment of Pediatrics, University of Washington School of Medicine, Seattle, Washington, United States.
Stephan PribitzerCenter for Systems Immunology, Benaroya Research Institute at Virginia Mason, Seattle, Washington, United States.
Steven F ZieglerCenter for Fundamental Immunology, Benaroya Research Institute at Virginia Mason, Seattle, Washington, United States.
Jason S DebleyCenter for Respiratory Biology and Therapeutics, Seattle Children's Research Institute, Seattle, Washington, United States.
Laurie C EldredgeCenter for Respiratory Biology and Therapeutics, Seattle Children's Research Institute, Seattle, Washington, United States.ORCID 0000-0001-6606-5366

Funding

The Bioinformatics and Data Management Core (BDMC)U19AI175089 · NIAID · UNIVERSITY OF WASHINGTON · PI JASON S DEBLEY, Teal S Hallstrand · 2023 to 2026
$7.8M
Dysregulated asthmatic epithelial interferon responses to viruses drive exacerbation, T2 inflammation, and airway remodelingR01AI163160 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI JASON S DEBLEY · 2022 to 2026
$4.3M
Impact of Heterogeneous Airway Epithelial ACE2 Expression and Interferon Responses on SARS-CoV2 Infectivity and ReplicationK24AI150991 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI DEBLEY, JASON S · 2020 to 2024
$1.2M
The role of IL-33 in hyperoxia-induced neonatal lung injury and bronchopulmonary dysplasiaK08HL140104 · NHLBI · UNIVERSITY OF WASHINGTON · PI ELDREDGE, LAURIE CHRISTINE · 2020 to 2024
$804k
American Lung Association (ALA)American Thoracic Society (ATS)Francis Family Foundation (FF) Parker B. Francis FellowshipHHS | NIH | National Heart, Lung, and Blood Institute (NHLBI) K08HL140104HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) K24AI150991HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI163160HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) U19AI175089NHLBI NIH HHS K08 HL140104NIAID NIH HHS K24 AI150991NIAID NIH HHS R01 AI163160NIAID NIH HHS U19 AI175089
6 · The paper itself

Abstract

Neonatal airway development and injury are poorly understood, in part due to challenges of studying extremes of phenotype in human pathological samples and difficulties obtaining relevant comparator samples. Ex vivo model systems are needed to improve understanding of airway development, injury, and repair in the neonatal lung. We optimized a protocol for organotypic culture of primary murine neonatal tracheal epithelial cells (MNTECs). We compared expansion and differentiation properties of MNTECs in five different media conditions, ranging from previously published "lab-made" media to commercial sources of media. We measured the success of our organotypic cultures by quantifying the relative proportions of ciliated epithelium, TP63+ basal stem cells, and stromal cell contamination, as well as total cell numbers and air-liquid interface (ALI) thickness. Commercially available media performed better than standard lab-made media, with nearly 100% success and 20% success, respectively. Proliferation in commercial media improves expansion of TP63+ basal cells, inhibits growth of contaminating stromal cells, and improves differentiation to a polarized, ciliated pseudostratified airway epithelium, when compared with lab-made LP media. These results provide a reliable technique for studying neonatal airway epithelial cells in wild-type and genetically mutant mice.

Indexed as

Epithelial CellsRespiratory MucosaTracheaAnimalsAnimals, NewbornCell DifferentiationCell ProliferationCells, CulturedMiceMice, Inbred C57BLOrgan Culture Techniquesairway epithelial cellsdifferentiationneonatalorganotypicprematurity

Identifiers

PMID41651467
PMCPMC13002024

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.