Evidence map›Paper›PMID 41649585›Full record

ArticleJournal of mathematical biology2026

Noise-induced bimodality in self-regulated gene networks with nonlinear promoter transitions and fast dimerization.

Shih-Hsun Hung, Je-Chiang Tsai, Chih-Chi Wu

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Article in Journal of mathematical biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

3 authors.

Shih-Hsun HungDepartment of Mathematics, National Tsing Hua University, No. 101, Sec. 2, Kuang-Fu Road, Hsinchu, 300, Taiwan.
Je-Chiang TsaiDepartment of Mathematics, National Tsing Hua University, No. 101, Sec. 2, Kuang-Fu Road, Hsinchu, 300, Taiwan. tsaijc.math@gmail.com.ORCID http://orcid.org/0000-0001-7334-6836
Chih-Chi WuDepartment of Applied Mathematics, National Yang Ming Chiao Tung University, No. 1001, Ta Hsueh Road, Hsinchu, 300, Taiwan.

Funding

National Science and Technology Council MOST 111-2115-M-007 -009 -MY3
6 · The paper itself

Abstract

We investigate noise-induced bimodal distributions in self-regulated gene networks with fast dimerization, where dimerized proteins enhance gene expression. Despite their fundamental role in gene regulation, analytical study of bimodal behaviour in such networks is challenging because the nonlinear interactions introduced by dimer formation render exact steady-state distributions infeasible. To address this, we reformulate the problem as a reduced self-regulated gene-expression model that approximates fast dimerization, in which the transition rate from the promoter-off to promoter-on state depends nonlinearly on protein levels. We introduce two diagnostic quantities: the promoter activity ratio, which quantifies promoter activation as a function of protein level, and the mode detection ratio, which identifies peaks of the steady-state protein distribution. Analysis of their recurrence relations reveals how promoter activity shapes the steady-state law, and how intrinsic stochasticity can generate multimodal protein distributions in self-regulated expression circuits. We further show that the corresponding mean-field ODE system admits a unique non-negative equilibrium when the protein synthesis-to-degradation ratio lies below an explicit threshold determined by the inactivation and dimer-induced activation rates. Hence, the bimodality we observe can arise purely from stochastic effects rather than deterministic bistability. Our approach provides a general framework for diagnosing noise-induced multimodality in gene networks with nonlinear promoter transitions, without relying on exact probability distributions, which are typically infeasible for nonlinear reaction rates, particularly in our case. Beyond its theoretical contribution, this work has conceptual relevance to sustainability: our mode-detection diagnostics and the distinction between deterministic multistability and noise-induced multimodality can inform assessments of resilience, early-warning indicators, and state persistence.

Indexed as

Gene Regulatory NetworksModels, GeneticPromoter Regions, GeneticGene Expression RegulationMathematical ConceptsNonlinear DynamicsProtein MultimerizationStochastic ProcessesDeterministic bistabilityDimerization processEarly-warning indicatorsGene expression networkNoise-induced bimodalityNonlinear promoter transitionsResilienceState persistenceSteady-state distribution

Identifiers

PMID41649585
PMCPMC12881043

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.