Evidence map›Paper›PMID 41648605›Full record

ArticlebioRxiv : the preprint server for biology2026

Endothelial Cell Secretome Alterations Induced by Inflammatory Stress.

Vi T Tang, Srishti Baid, Alejandra Castellanos, Venkatesha Basrur, Colin A Kretz, Alexey I Nesvizhskii, Xiang Gao, Qunfeng Dong, Mitchell J Weiss, Prabhodh S Abbineni

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Vi T TangDepartment of Genetics, Harvard Medical School, Boston, Massachusetts, USA.ORCID 0000-0001-6079-9756
Srishti BaidLife Sciences Institute, University of Michigan, Ann Arbor, Michigan, USA.ORCID 0000-0002-8371-3588
Alejandra CastellanosDepartment of Microbiology and Immunology, Loyola University Chicago, Maywood, Illinois, USA.
Venkatesha BasrurDepartment of Pathology, University of Michigan, Ann Arbor, Michigan, USA.ORCID 0000-0002-0853-9655
Colin A KretzDepartment of Medicine, Thrombosis and Atherosclerosis Research Institute, McMaster University, Hamilton, ON, Canada.ORCID 0000-0001-7979-7603
Alexey I NesvizhskiiDepartment of Pathology, University of Michigan, Ann Arbor, Michigan, USA.ORCID 0000-0002-2806-7819
Xiang GaoDepartment of Medicine, Stritch School of Medicine, Loyola University Chicago, Illinois, USA.
Qunfeng DongDepartment of Medicine, Stritch School of Medicine, Loyola University Chicago, Illinois, USA.
Mitchell J WeissDepartment of Hematology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0003-2460-3036
Prabhodh S AbbineniDepartment of Microbiology and Immunology, Loyola University Chicago, Maywood, Illinois, USA.ORCID 0000-0002-9700-0044

Funding

COMPUTATIONAL TOOLS FOR MASS SPECTROMETRY-BASED INTERACTOME DATAR01GM094231 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Alexey I Nesvizhskii · 2010 to 2026
$5.4M
Novel therapeutic gene editing to induce fetal hemoglobin for sickle cell diseaseU01HL163983 · NHLBI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Akshay Sharma, Shengdar Tsai · 2023 to 2026
$4.9M
PedGeneRx - Admin Supplement to Base Editing and Prime Editing for Sickle Cell Disease R01R01HL156647 · NHLBI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Agnieszka Czechowicz, DAVID R LIU · 2021 to 2026
$4.8M
Michigan Center for Translational Cancer Proteogenomics-Diversity SupplementU24CA271037 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Saravana Mohan Dhanasekaran, Alexey I Nesvizhskii · 2022 to 2026
$4.4M
ULK-mediated autophagy of α-globin in ß-thalassemiaR01HL165798 · NHLBI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI WEISS, MITCHELL J · 2022 to 2025
$2.6M
Examining Molecular Regulation of Unconventional Cytoplasmic Protein SecretionR00GM141268 · NIGMS · LOYOLA UNIVERSITY CHICAGO · PI ABBINENI, PRABHODH SAI · 2023 to 2025
$747k
NCI NIH HHS U24 CA271037NHLBI NIH HHS R01 HL156647NHLBI NIH HHS R01 HL165798NHLBI NIH HHS U01 HL163983NIGMS NIH HHS R00 GM141268NIGMS NIH HHS R01 GM094231
6 · The paper itself

Abstract

Endothelial cells detect pathogens through pattern recognition receptors, such as Toll-like receptor 4 (TLR4), which triggers the synthesis and secretion of molecules that initiate the innate immune response. Proteins bearing signal peptides are secreted through the classical endoplasmic reticulum (ER)-Golgi-dependent route, whereas select signal-peptide-lacking cytoplasmic proteins are secreted via less well-characterized ER-Golgi-independent mechanisms, collectively termed unconventional cytoplasmic protein secretion (UCPS). To systematically characterize the secretome of human umbilical vein-derived endothelial cells (HUVECs) and delineate the contribution of UCPS, we performed deep quantitative proteomics on HUVEC cell lysates and conditioned medium before and after TLR4 stimulation with lipopolysaccharide (LPS). Of 5205 proteins detected in either fraction, 381 were enriched in the conditioned medium and therefore classified as secreted. Of these, 333 proteins (87.4%) were secreted via the conventional pathway, and 48 (12.6%) were secreted via UCPS, 43 of which were not previously associated with this process. Predicted functions of UCPS-secreted proteins include redox regulation, proteostasis, cytoskeletal remodeling, and innate immune signaling. We confirmed that α-globin (HBA1), which functions as a redox sensor and regulator of nitric oxide in endothelial cells, is secreted constitutively by UCPS and at higher levels following inflammatory activation. Notably, UCPS cargo identity showed poor concordance with current computational predictors, underscoring the need for empirical datasets. Overall, our findings suggest that the HUVEC secretome includes both conventionally and unconventionally secreted proteins that regulate coagulation, angiogenesis, and immune function. Our findings establish a high-quality secretome dataset for HUVECs, providing a novel resource for future efforts to define the molecular determinants governing UCPS cargo selection and trafficking related to endothelial cell function.

Identifiers

PMID41648605
PMCPMC12871323

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.