Evidence map›Paper›PMID 41648509›Full record

ArticlebioRxiv : the preprint server for biology2026

Mechanistically Defined Epoxide- and Aziridine-2-carboxamide Electrophiles Enable Stereoselective Covalent RNA Modulation.

Chungen Li, Xueyi Yang, Jingsong Shan, Kyle A Dickerson, Noah A Springer, Nikhil C Munshi, Robert T Batey, Matthew D Disney

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Chungen LiDepartment of Chemistry, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, 130 Scripps Way, Jupiter, FL 33458 USA.ORCID 0009-0007-7895-8808
Xueyi YangDepartment of Chemistry, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, 130 Scripps Way, Jupiter, FL 33458 USA.ORCID 0000-0003-3876-1852
Jingsong ShanDepartment of Chemistry, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, 130 Scripps Way, Jupiter, FL 33458 USA.ORCID 0000-0002-7252-6672
Kyle A DickersonDepartment of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, CO 80309-0596, USA.
Noah A SpringerDepartment of Chemistry, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, 130 Scripps Way, Jupiter, FL 33458 USA.ORCID 0000-0001-8868-0415
Nikhil C MunshiDepartment of Medical Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA 02215, USA.
Robert T BateyDepartment of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, CO 80309-0596, USA.ORCID 0000-0002-1384-6625
Matthew D DisneyDepartment of Chemistry, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, 130 Scripps Way, Jupiter, FL 33458 USA.ORCID 0000-0001-8486-1796

Funding

Design of Precision Small Molecules Targeting RNA Repeating Transcripts to Manipulate and Study Disease BiologyR35NS116846 · NINDS · UNIVERSITY OF FLORIDA · PI Matthew D Disney · 2020 to 2026
$9.4M
Riboswitches and their application to RNA visualization and transcription factor interactions with the transcriptomeR35GM152029 · NIGMS · UNIVERSITY OF COLORADO · PI Robert T Batey · 2024 to 2026
$1.8M
NIGMS NIH HHS R35 GM152029NINDS NIH HHS R35 NS116846
6 · The paper itself

Abstract

RNA remains a largely untapped target for covalent small-molecule intervention due to the lack of electrophiles with predictable reactivity and stability in biological settings. Here, a mechanistically defined and tunable class of epoxide- and aziridine-2-carboxamide electrophiles that enable structure-guided covalent targeting of RNA is described. These warheads arise from an unexpected hydrolytic rearrangement of 3-chloropivalamide precursors under physiological conditions and selectively react with guanine N7, with reactivity and stability controlled by substitution pattern, linkage chemistry, and stereochemistry. Application to two distinct RNA targets demonstrates generality: epoxide- and aziridine-based ligands covalently modify pathogenic r(CUG)

Indexed as

Aziridine ChemistryCovalent Small MoleculesElectrophile DesignEpoxide ReactivityRNA Chemical BiologyRNA Modification

Identifiers

PMID41648509
PMCPMC12871170

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.