Evidence map›Paper›PMID 41648192›Full record

ArticlebioRxiv : the preprint server for biology2026

Oxidative stress induces

Rachel L Markley, Isabel Johnston, Viharika Bobba, Srishti Ithychanda, Genevieve Mann, Emma Dester, Kelsey Ouyang, Brianna P Matthew, Jan Claesen

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Rachel L MarkleyDepartment of Heart, Blood & Kidney Research, Cleveland Clinic Research; Cleveland, OH, USA.ORCID 0000-0003-2114-708X
Isabel JohnstonDepartment of Heart, Blood & Kidney Research, Cleveland Clinic Research; Cleveland, OH, USA.ORCID 0000-0002-2770-2841
Viharika BobbaDepartment of Heart, Blood & Kidney Research, Cleveland Clinic Research; Cleveland, OH, USA.ORCID 0000-0003-3958-9388
Srishti IthychandaDepartment of Heart, Blood & Kidney Research, Cleveland Clinic Research; Cleveland, OH, USA.ORCID 0009-0002-3144-3894
Genevieve MannDepartment of Heart, Blood & Kidney Research, Cleveland Clinic Research; Cleveland, OH, USA.ORCID 0009-0000-1160-3489
Emma DesterDepartment of Molecular Medicine, Cleveland Clinic Lerner College of Medicine of Case Western Reserve University; Cleveland, Ohio, USA.ORCID 0000-0003-1256-7752
Kelsey OuyangDepartment of Molecular Medicine, Cleveland Clinic Lerner College of Medicine of Case Western Reserve University; Cleveland, Ohio, USA.ORCID 0000-0003-2637-9330
Brianna P MatthewDepartment of Molecular Medicine, Cleveland Clinic Lerner College of Medicine of Case Western Reserve University; Cleveland, Ohio, USA.ORCID 0000-0003-3805-6635
Jan ClaesenDepartment of Heart, Blood & Kidney Research, Cleveland Clinic Research; Cleveland, OH, USA.ORCID 0000-0002-0755-7974

Funding

Uncovering aryl polyene biology to identify new drug targets in Gram-negative bacterial pathogensR01AI153173 · NIAID · CLEVELAND CLINIC LERNER COM-CWRU · PI CLAESEN, JAN · 2021 to 2025
$2.0M
NIAID NIH HHS R01 AI153173
6 · The paper itself

Abstract

Aryl polyenes (APEs) are specialized polyunsaturated outer membrane lipids that protect their producers from oxidative stress and contribute to biofilm formation. APEs are produced by an abundant biosynthetic gene cluster (BGC) family conserved across Gram-negative bacterial clades. The APE biosynthesis pathway involves 11 different enzymes and cumulates in the attachment of APEs to an anchor molecule in the Gram-negative outer membrane. Unlike most other small molecule BGCs, the APE BGC does not contain a dedicated regulatory gene that controls production of its metabolically costly compounds. Building from our prior observations of APEs role in acute oxidative stress protection, we here use a uropathogenic

Indexed as

Aryl polyenesfitness factoroxidative stressphagocyteuropathogenic E. coli

Identifiers

PMID41648192
PMCPMC12871727

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.