Evidence map›Paper›PMID 41647353›Full record

ReviewESMO real world data and digital oncology2025

Collaborating across sectors in service of open science, precision oncology, and patients: an overview of the AACR Project GENIE (Genomics Evidence Neoplasia Information Exchange) Biopharma Collaborative (BPC).

A Acebedo, P L Bedard, S Brown, E Ceca, M Fiandalo, H Fuchs, X Guo, J N Hoppe, K L Kehl, R Kundra and 25 more

Abstract readReview
In one paragraph

Review in ESMO real world data and digital oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Learning Patient Similarity from Genomics for Precision Oncology.medRxiv : the preprint server for health sciences · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors.

A AcebedoAmerican Association for Cancer Research, Philadelphia, USA.
P L BedardUniversity Health Network, Princess Margaret Cancer Center, Toronto, Canada.
S BrownMemorial Sloan Kettering Cancer Center, New York, USA.
E CecaDana-Farber Cancer Center, Boston, USA.
M FiandaloAmerican Association for Cancer Research, Philadelphia, USA.
H FuchsMemorial Sloan Kettering Cancer Center, New York, USA.
X GuoSage Bionetworks, Seattle, USA.
J N HoppeAmerican Association for Cancer Research, Philadelphia, USA.
K L KehlDana-Farber Cancer Center, Boston, USA.
R KundraMemorial Sloan Kettering Cancer Center, New York, USA.
J A LaveryMemorial Sloan Kettering Cancer Center, New York, USA.
M L LeNoue-NewtonVanderbilt University Medical Center, Nashville, USA.
E LepistoDana-Farber Cancer Center, Boston, USA.
B MastrogiacomoMemorial Sloan Kettering Cancer Center, New York, USA.
C M MicheelVanderbilt University Medical Center, Nashville, USA.
C NayanSage Bionetworks, Seattle, USA.
A NewcombDana-Farber Cancer Center, Boston, USA.
C NicholsMemorial Sloan Kettering Cancer Center, New York, USA.
K S PanageasMemorial Sloan Kettering Cancer Center, New York, USA.
B PieningProvidence Cancer Center, Portland, USA.
S PillaiMemorial Sloan Kettering Cancer Center, New York, USA.
A PostleDana-Farber Cancer Center, Boston, USA.
R PotterVanderbilt University Medical Center, Nashville, USA.
G J RielyMemorial Sloan Kettering Cancer Center, New York, USA.
H RizviMemorial Sloan Kettering Cancer Center, New York, USA.
J RudolphMemorial Sloan Kettering Cancer Center, New York, USA.
D SchragMemorial Sloan Kettering Cancer Center, New York, USA.
S M SweeneyAmerican Association for Cancer Research, Philadelphia, USA.
E A Sweet-CorderoDepartment of Pediatrics, University of California San Francisco, San Francisco, USA.
M TurskiDepartment of Pediatrics, University of California San Francisco, San Francisco, USA.
E WingordDepartment of Pediatrics, University of California San Francisco, San Francisco, USA.
T J WuAmerican Association for Cancer Research, Philadelphia, USA.
T YuSage Bionetworks, Seattle, USA.
C YuUniversity Health Network, Princess Margaret Cancer Center, Toronto, Canada.
AACR Project GENIE Consortium

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The American Association for Cancer Research (AACR) Project GENIE (Genomics Evidence Neoplasia Information Exchange) Biopharma Collaborative (BPC) is a multi-phase, pre-competitive collaboration between 10 biopharmaceutical companies and select GENIE-participating academic institutions, focused on detailed clinical annotations of a subset of patients within the GENIE Registry. The cohorts focus on 10 solid tumors, and each integrates demographic, diagnosis, genomic, and treatment data with longitudinal, real-world patient outcomes. Data are collected following a structured framework to ensure interoperability and forward compatibility with other data models. Each cohort undergoes a series of rigorous quality control and assurance protocols which ensures consistency, accuracy, and reliability of the data across multiple institutions before public release of the data. Initial analyses of the BPC data have yielded valuable insights, including the validation of treatment-induced resistance mutations and genomic drivers associated with anatomic sites of metastasis. Additionally, the real-world response endpoints compare favorably to published trial results. Central management and a shared knowledgebase help integrate diverse functional teams in the execution of a complex, multi-institutional data collection effort. Future directions aim to automate significant portions of the clinical annotation process to collect clinical data at scale. These efforts will increase the depth and granularity of the BPC data, as well as expand the overall cohort size and range of cancer types represented.

Indexed as

AACR Project GENIEclinico-genomic datalongitudinal dataprecision medicinereal-world datareal-world patient outcomes

Identifiers

PMID41647353
PMCPMC12836680

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.