Evidence map›Paper›PMID 41644621›Full record

ArticleScientific reports2026

Genomic analysis of ST117, 155, 1011, 167, 744, and 17391 in poultry-associated multidrug resistant Escherichia coli isolates from India.

Rogith P, Lakshmi Srijith, Karthic G, Ramanakishore V S, Kopula Sathyamoorthy Sridharan, Agastian Paul, Kumar Perumal

Abstract read
In one paragraph

Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Rogith PDepartment of Biotechnology, Sri Ramachandra Institute of Higher Education and Research, Porur, Tamil Nadu, India.
Lakshmi SrijithDepartment of Biotechnology, Sri Ramachandra Institute of Higher Education and Research, Porur, Tamil Nadu, India.
Karthic GDepartment of Biotechnology, Sri Ramachandra Institute of Higher Education and Research, Porur, Tamil Nadu, India.
Ramanakishore V SDepartment of Biotechnology, Sri Ramachandra Institute of Higher Education and Research, Porur, Tamil Nadu, India.
Kopula Sathyamoorthy SridharanDepartment of Laboratory Medicine, Sri Ramachandra Institute of Higher Education and Research, Porur, Tamil Nadu, India.
Agastian PaulDepartment of Plant Biology and Biotechnology, Loyola college Nungambakkam, Chennai, India.
Kumar PerumalDepartment of Biotechnology, Sri Ramachandra Institute of Higher Education and Research, Porur, Tamil Nadu, India. kumar.p@sriramachandra.edu.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multidrug-resistant Escherichia coli originating from poultry farms pose a significant One Health threat because of their emergence and spread connecting agricultural farms and the environment causing infections in humans. In this study, 38 isolates were collected, all of which exhibited resistance to penicillin, cephalosporins, fluoroquinolones and tetracycline, with an average Multiple Antibiotic Resistance (MAR) Index of 0.55. Among these 38 isolates, 7 isolates having ≥ 0.6 MAR index were subjected to whole genome sequencing - KEED-2 (ST117), KEED-3 (ST155), MTBW-1 (ST1011), MTBW-2 (ST167), PUND-1 (ST117), PUND-3 (ST17391) and VELW-1 (ST744). The analysis revealed the presence of antimicrobial-resistance genes such as tetracycline (tet(A)), quinolone (QnrS1) and aminoglycosides (aph(4)-Ia, aac(3)-IVa, aac(3)-IId, aph(3’’)-Ib, aph(3’)-Ia, aph(6)-Id). Notably, the CTX-M gene was present in KEED-2 (ST117), and the TEM-1B gene was present in MTBW-1 (ST1011) and VELW-1 (ST744). In this study, pandemic clones ST167, ST744 and ST17391 were identified, which has not been reported so far in poultry environments in India to the best of our knowledge, highlighting the need for continued surveillance and effective control measures, emphasising significance for the One Health framework.

Indexed as

Drug Resistance, Multiple, BacterialEscherichia coliEscherichia coli InfectionsPoultryPoultry DiseasesAnimalsAnti-Bacterial AgentsGenome, BacterialGenomicsIndiaMicrobial Sensitivity TestsWhole Genome SequencingAnti-Bacterial AgentsMDR Escherichia coliPoultry bedding materialWaterWhole genome sequencing

Identifiers

PMID41644621
PMCPMC12929802

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.