Evidence map›Paper›PMID 41643603›Full record

ArticleBioorganic & medicinal chemistry2026

5,6-Fused heterocycle cholate derivatives as spore germination inhibitors of Clostridioides difficile.

Shiv K Sharma, Jacqueline R Phan, Efren Heredia, Ernesto Abel-Santos, Steven M Firestine

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Shiv K SharmaDepartment of Pharmaceutical Sciences, Eugene Applebaum College of Pharmacy and Health Sciences, Wayne State University, 259 Mack Avenue, Detroit, MI 48201, United States.
Jacqueline R PhanDepartment of Chemistry and Biochemistry, University of Nevada at Las Vegas, 4505 S. Maryland Pkwy., Las Vegas, NV 89154, United States.
Efren HerediaDepartment of Chemistry and Biochemistry, University of Nevada at Las Vegas, 4505 S. Maryland Pkwy., Las Vegas, NV 89154, United States.
Ernesto Abel-SantosDepartment of Chemistry and Biochemistry, University of Nevada at Las Vegas, 4505 S. Maryland Pkwy., Las Vegas, NV 89154, United States.
Steven M FirestineDepartment of Pharmaceutical Sciences, Eugene Applebaum College of Pharmacy and Health Sciences, Wayne State University, 259 Mack Avenue, Detroit, MI 48201, United States. Electronic address: sfirestine@wayne.edu.

Funding

Using bile salt metabolism to modulate CDI prophylaxisR01AI109139 · NIAID · UNIVERSITY OF NEVADA LAS VEGAS · PI Ernesto V Abel-Santos · 2015 to 2026
$5.4M
NIAID NIH HHS R01 AI109139
6 · The paper itself

Abstract

Clostridioides difficile is an anaerobic bacterium that is responsible for most antibiotic-associated cases of diarrhea. Clostridioides difficile infection (CDI) begins with the ingestion of an environmentally stable spore that germinates within the GI tract if the concentration and composition of bile salts, ions, and amino acids are favorable. We have shown that the bile salt analog N-phenyl-cholan-24-amide (1) can inhibit spore germination and prevent CDI in animal models of infection. Unfortunately, 1, while stable in the gut of antibiotic-treated animals, is rapidly degraded by normal gastrointestinal microbiota to release cholate and aniline. This instability prevents its use as a prophylactic for CDI. To generate more stable bile salt analogs, we removed the amide by either reducing it to an amine or converting it into 5,6-fused heterocycles. We found that reduction of the amide to an amine resulted in a significant loss of activity, but cyclization to benzimidazole (6a), benzothiazole (6b), or benzoxazole (6c) gave anti-germinants with good IC

Indexed as

Anti-Bacterial AgentsCholic AcidsClostridioides difficileHeterocyclic CompoundsSpores, BacterialAnimalsClostridium InfectionsMiceMicrobial Sensitivity TestsMolecular StructureStructure-Activity RelationshipAnti-Bacterial AgentsCholic AcidsHeterocyclic CompoundsBile salt analogClostridioides difficileInhibitorSpore germination

Identifiers

PMID41643603
PMCPMC13167066

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.