Evidence map›Paper›PMID 41642497›Full record

ArticleAntonie van Leeuwenhoek2026

Microbial degradation of phenol and derivatives using environmental isolates from industrial waste sources.

Selin Saricayir, Tayyibe Alpay, Bike Pashayeva, Ayhan Ezdesir, Guven Ozdemir

Abstract read
In one paragraph

Article in Antonie van Leeuwenhoek, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Selin SaricayirDepartment of Biology, Section of Basic and Industrial Microbiology, Ege University, Izmir, Turkey.ORCID http://orcid.org/0000-0002-5639-100X
Tayyibe AlpaySOCAR Turkey R&D and Innovation Co., Refinery & Petrochemical Business Unit, Izmir, Turkey.ORCID http://orcid.org/0000-0002-4733-8004
Bike PashayevaSOCAR Turkey R&D and Innovation Co., Refinery & Petrochemical Business Unit, Izmir, Turkey.ORCID http://orcid.org/0009-0009-5014-5455
Ayhan EzdesirSOCAR Turkey R&D and Innovation Co., Refinery & Petrochemical Business Unit, Izmir, Turkey.ORCID http://orcid.org/0000-0001-9032-6749
Guven OzdemirDepartment of Biology, Section of Basic and Industrial Microbiology, Ege University, Izmir, Turkey. guven.ozdemir@ege.edu.tr.ORCID http://orcid.org/0000-0002-7577-4233

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study investigates the microbial degradation of phenolic compounds using environmental bacterial isolates obtained from refinery wastewater and petroleum-contaminated soil. Phenolic pollutants are highly toxic and persistent, posing significant challenges for biological wastewater treatment systems. To address this issue, microorganisms were enriched under increasing phenolic loads using Bushnell Haas Yeast (BHY) medium supplemented with phenol and mixed phenolic derivatives as the sole carbon source. Through adaptive passaging, two phenol-tolerant isolates were obtained and identified by 16S rRNA sequencing as Microbacterium arabinogalactanolyticum (PKN7) and Brevundimonas diminuta (VGT4). Time-resolved HPLC analyses demonstrated that both isolates completely degraded phenol within 120 h in BHY medium containing 20 mg/L phenol and 30 mg/L mixed phenolic compounds. While the strains exhibited only partial degradation of chlorophenols and cresols, consortium experiments showed enhanced performance in the mixed culture: the mixed culture achieved complete degradation of 2,4-dinitrophenol within 12 h and complete phenol removal within 60 h, while removing 73-78% of the remaining phenolic derivatives. These results confirm that cooperative metabolic interactions substantially enhance degradation performance under mixed-pollutant conditions. Overall, this study identifies M. arabinogalactanolyticum and B. diminuta as promising non-model phenol degraders, particularly when applied as a defined microbial consortium. Their combined activity highlights the potential for bioaugmentation-based strategies in industrial wastewater treatment systems. Further pilot-scale studies using real refinery effluents are needed to evaluate long-term stability and field applicability.

Indexed as

BacteriaIndustrial WastePhenolPhenolsBiodegradation, EnvironmentalRNA, Ribosomal, 16SWastewaterIndustrial WastePhenolPhenolsRNA, Ribosomal, 16SWastewaterBioremediationBrevundimonas diminutaMicrobacterium arabinogalactanolyticumPhenol degradationRefinery wastewater

Identifiers

PMID41642497
PMCPMC12876542

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.