ArticleFrontiers in plant science2025
Integrated QTL mapping and candidate gene analysis for yield-related traits and salt tolerance in a rice RIL population.
Article in Frontiers in plant science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
Rice is a globally critical staple crop, and enhancing its yield and stress resilience is essential for food security. In this study, we employed a recombinant inbred line (RIL) population derived from cultivars Liangxiang5 and 03GY28 to dissect the genetic basis of yield-related traits, leaf color, and germination stage salt tolerance. A high-density genetic map was constructed using 1, 101 bin markers, spanning 1, 132.95 cM with an average marker interval of 1.03 cM. Over two-year field trials, we identified 16 quantitative trait loci (QTLs) for nine agronomic traits distributed across chromosomes 3, 5, 6, 7, 9, and 11. These QTLs accounted for 5.48%-19.03% of phenotypic variance (PVE), with LOD scores ranging from 2.52 to 8.93. Notably, a major-effect QTL, qLeafColor9.1, explaining 19.03% of variance and was mapped to chromosome 9 and co-localized with the known senescence-associated gene
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