Evidence map›Paper›PMID 41639133›Full record

ArticleScientific data2026

Chromosome level genome and full length transcriptome of long whiskers catfish, Mystus gulio (Hamilton, 1822).

Sudheesh K Prabhudas, Vinaya Kumar Katneni, Ashok Kumar Jangam, Karthic Krishnan, Ashok Selvaraj, Jesudhas Raymond Jani Angel, Mudagandur S Shekhar

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sudheesh K PrabhudasICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, Chennai, 600028, Tamil Nadu, India.ORCID http://orcid.org/0000-0002-8888-7157
Vinaya Kumar KatneniICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, Chennai, 600028, Tamil Nadu, India.ORCID http://orcid.org/0000-0002-3112-0465
Ashok Kumar JangamICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, Chennai, 600028, Tamil Nadu, India.
Karthic KrishnanICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, Chennai, 600028, Tamil Nadu, India.
Ashok SelvarajICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, Chennai, 600028, Tamil Nadu, India.
Jesudhas Raymond Jani AngelICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, Chennai, 600028, Tamil Nadu, India.
Mudagandur S ShekharICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, Chennai, 600028, Tamil Nadu, India. msshekhar@hotmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mystus gulio (Hamilton, 1822), the long whiskers catfish, belongs to the family Bagridae and inhabits brackishwater. The current study employed a multi-platform sequencing strategy including, PacBio HiFi, Illumina short read and high-throughput chromosome conformation capturing (Hi-C) sequencing technologies to generate raw data and assemble a chromosome level genome. The final assembly is 706.32 Mb with an N50 length of 22.79 Mb and 96.56% of the assembly anchored to 29 chromosomes. Repeat sequences accounted for 32.66% of the genome, and BUSCO analysis revealed a genome completeness of 98.1% against actinopterygii_odb12. The full-length transcriptomes were also generated with PacBio Iso-Sequencing strategy for ten tissues (gills, kidney, liver, muscle, ovary, skin, stomach, arborescent organ, dorsal barbel and gallbladder). The transcriptome data generated was integrally used to predict 23,339 protein encoding genes, comprehensive classification of isoforms and analysis of alternate splicing events across the tissues. The resources generated in the study will give meaningful insights into its nutritional potential, ecological functions for the genetic improvement, molecular breeding and evolutionary studies of M. gulio.

Indexed as

CatfishesChromosomesGenomeTranscriptomeAnimals

Identifiers

PMID41639133
PMCPMC12979812

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.