Evidence map›Paper›PMID 41639127›Full record

ArticleScientific data2026

Genome sequencing, de novo assembly and annotation of the commercially important bamboo, Bambusa tulda Roxb.

Sutrisha Kundu, Oliver Rupp, Sonali Dey, Mridushree Basak, Sudeshna Bera, Annette Becker, Malay Das

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sutrisha KunduPlant Genomics Laboratory, Department of Life Sciences, Presidency University, 86/1 College Street, Kolkata, 700073, West Bengal, India.ORCID http://orcid.org/0000-0002-8173-3622
Oliver RuppBioinformatik und Systembiologie, Justus-Liebig-University, Gießen, D-35390, Germany.
Sonali DeyPlant Genomics Laboratory, Department of Life Sciences, Presidency University, 86/1 College Street, Kolkata, 700073, West Bengal, India.
Mridushree BasakPlant Genomics Laboratory, Department of Life Sciences, Presidency University, 86/1 College Street, Kolkata, 700073, West Bengal, India.
Sudeshna BeraPlant Genomics Laboratory, Department of Life Sciences, Presidency University, 86/1 College Street, Kolkata, 700073, West Bengal, India.
Annette BeckerInstitute of Botany, Justus-Liebig-University, Gießen, D-35392, Germany. annette.becker@bot1.bio.uni-giessen.de.ORCID http://orcid.org/0000-0002-3229-2162
Malay DasPlant Genomics Laboratory, Department of Life Sciences, Presidency University, 86/1 College Street, Kolkata, 700073, West Bengal, India. malay.dbs@presiuniv.ac.in.ORCID http://orcid.org/0000-0002-5331-8157

Funding

Alexander von Humboldt-Stiftung (Alexander von Humboldt Foundation) Ref 3.4 - 1131176 - IND - IP
6 · The paper itself

Abstract

Bambusa tulda Roxb., a member of the Bambusoideae subfamily, is an ecologically and commercially important plant resource widely distributed in the Indian subcontinent. Our study reports long-read PacBio HiFi sequencing and genome assembly of B. tulda. The de novo haploid genome assembly of B. tulda predicted 43 contigs, distributed across three subgenomes, with a total sequenced length of 1.37 Gb, contig N50 of 35.69 Mb, and BUSCO score 99%. Repetitive elements constitute 63.31% of the genome. Functional annotation predicted 56,890 protein-coding genes, constituting 19.44% of the genome. This genome sequence will serve as an invaluable resource for future studies on the life history traits, phylogenomic analysis, comparative genomics, and targeted genome modification for important trait improvement of B. tulda.

Indexed as

BambusaGenome, PlantMolecular Sequence AnnotationSequence Analysis, DNA

Identifiers

PMID41639127
PMCPMC12873296

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.