Evidence map›Paper›PMID 41638478›Full record

ArticleCellular and molecular gastroenterology and hepatology2026

Spatial Analysis of Intraductal Papillary Mucinous Neoplasms Defines a Paradoxical Keratin 17-Positive, Low-Grade Epithelial Population Harboring Malignant Features.

Jay Li, Georgina Branch, Justin Macchia, Ahmed M Elhossiny, Nandini Arya, Julia Liang, Padma Kadiyala, Nicole Peterson, Richard Kwon, Jorge D Machicado and 13 more

Abstract read
In one paragraph

Article in Cellular and molecular gastroenterology and hepatology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors.

Jay LiDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan.
Georgina BranchDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.
Justin MacchiaDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.
Ahmed M ElhossinyDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan.
Nandini AryaDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.
Julia LiangDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.
Padma KadiyalaDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.
Nicole PetersonDivision of Hematology and Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.
Richard KwonDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.
Jorge D MachicadoDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.
Erik-Jan WamstekerDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.
Allison SchulmanDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.
George PhilipsDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; Division of Gastroenterology, Veterans Affairs Health System, Ann Arbor, Michigan.
Stacy MeneesDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; Division of Gastroenterology, Veterans Affairs Health System, Ann Arbor, Michigan.
Jonathan XiaDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.
Aatur D SinghiDepartment of Pathology, University of Pittsburgh, Pittsburgh, Pennsylvania.
Vaibhav SahaiDivision of Hematology and Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; Rogel Cancer Center, University of Michigan, Ann Arbor, Michigan; Rogel and Blondy Center for Pancreatic Cancer, University of Michigan, Ann Arbor, Michigan.
Jiayun M FangDepartment of Pathology, Veteran Affairs Ann Arbor Healthcare System, Ann Arbor, Michigan.
Timothy L FrankelRogel Cancer Center, University of Michigan, Ann Arbor, Michigan; Rogel and Blondy Center for Pancreatic Cancer, University of Michigan, Ann Arbor, Michigan; Department of Surgery, Veteran Affairs Ann Arbor Healthcare System, Ann Arbor, Michigan; Department of Surgery, University of Michigan, Ann Arbor, Michigan.
Filip BednarRogel Cancer Center, University of Michigan, Ann Arbor, Michigan; Rogel and Blondy Center for Pancreatic Cancer, University of Michigan, Ann Arbor, Michigan; Department of Surgery, University of Michigan, Ann Arbor, Michigan.
Marina Pasca di MaglianoRogel Cancer Center, University of Michigan, Ann Arbor, Michigan; Rogel and Blondy Center for Pancreatic Cancer, University of Michigan, Ann Arbor, Michigan; Department of Surgery, University of Michigan, Ann Arbor, Michigan.
Jiaqi ShiRogel Cancer Center, University of Michigan, Ann Arbor, Michigan; Rogel and Blondy Center for Pancreatic Cancer, University of Michigan, Ann Arbor, Michigan; Department of Pathology, University of Michigan, Ann Arbor, Michigan.
Eileen S CarpenterDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; Division of Gastroenterology, Veterans Affairs Health System, Ann Arbor, Michigan; Rogel Cancer Center, University of Michigan, Ann Arbor, Michigan; Rogel and Blondy Center for Pancreatic Cancer, University of Michigan, Ann Arbor, Michigan. Electronic address: eicarpen@med.umich.edu.

Funding

Training Program in Tumor MicroenvironmentT32CA009676 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Maria G Castro, Analisa Virginia DiFeo · 1992 to 2026
$7.3M
Defining epigenetic signaling to reshape pancreatic tumor microenvironmentR37CA262209 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Jiaqi Shi · 2022 to 2026
$2.3M
BLRD VA IK2 BX005875NCI NIH HHS R37 CA262209NCI NIH HHS T32 CA009676
6 · The paper itself

Abstract

BACKGROUND &

aimsIntraductal papillary mucinous neoplasms (IPMNs) are pancreatic cysts that represent one of the few radiologically identifiable precursors to pancreatic ductal adenocarcinoma (PDAC). Although the IPMN-bearing patient population represents a unique opportunity for early detection and interception, current guidelines provide insufficient accuracy in determining which patients should undergo resection vs surveillance, resulting in a sizable fraction of resected IPMNs only harboring low-grade dysplasia, suggesting that there may be overtreatment of this clinical entity.

methodsTo investigate the transcriptional changes that occur during IPMN progression, we performed spatial transcriptomics using the Nanostring GeoMx on patient samples containing the entire spectrum of IPMN disease including low-grade dysplasia, high-grade dysplasia, and IPMN-derived carcinoma. Single-cell RNA sequencing was performed on side branch and main duct IPMN biospecimens.

resultsWe identified a subpopulation of histologically low-grade IPMN epithelial cells that express malignant transcriptional features including KRT17, S100A10, and CEACAM5, markers that are enriched in PDAC. We validated this high-risk gene signature in both single-cell RNA sequenced samples and an external spatial transcriptomic dataset containing a larger number of IPMN samples with non-tumor bearing IPMN (ie, low-grade IPMN in isolation). Immunofluorescence staining of a large cohort of patient tissues confirmed the presence of Keratin 17-positive cells, which were found to comprise a small subset of epithelial cells within histologically low-grade IPMN in a patchy distribution.

conclusionsOur study demonstrates that Keratin 17 marks a distinct transcriptional signature in a subpopulation of epithelial cells within histologically low-grade IPMN. This population of cells likely represents a transitional state of histologically low-grade epithelial cells undergoing progression to a higher grade of dysplasia and thus may represent a higher risk of progression to carcinoma.

Indexed as

Adenocarcinoma, MucinousCarcinoma, Pancreatic DuctalPancreatic Intraductal NeoplasmsPancreatic NeoplasmsAgedBiomarkers, TumorCarcinoembryonic AntigenDisease ProgressionEpithelial CellsFemaleGene Expression Regulation, NeoplasticGPI-Linked ProteinsHumansKeratin-17MaleMiddle AgedBiomarkers, TumorCarcinoembryonic AntigenCEACAM5 protein, humanGPI-Linked ProteinsKeratin-17KRT17 protein, humanintraductal papillary mucinous neoplasmpancreatic cancerpancreatic cystprecancerous lesionsingle cell sequencingspatial transcriptomics

Identifiers

PMID41638478
PMCPMC13000727

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.