Evidence map›Paper›PMID 41629563›Full record

ArticleScientific reports2026

Metagenomic analysis revealed the presence of novel Actinomycetota "Candidatus Solincola uaceae" sp. nov., obtained from a hot spring.

Warunya Suksa, Wen-Jun Li, Zhen-Hao Luo, Jian-Yu Jiao, Vania Ponce, Kattia Nuñez-Montero, Patricio Arce-Johnson, Neeta Raj Sharma, Arinthip Thamchaipenet, Manik Prabhu Narsing Rao

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Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Warunya SuksaDepartment of Genetics, Faculty of Science, Kasetsart University, Bangkok, 10900, Thailand.
Wen-Jun LiDepartment of Genetics, Faculty of Science, Kasetsart University, Bangkok, 10900, Thailand.
Zhen-Hao LuoState Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Stress Biology, School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275, People's Republic of China.
Jian-Yu JiaoState Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Stress Biology, School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275, People's Republic of China.
Vania PonceInstituto de Ciencias Aplicadas, Facultad de Ingeniería , Universidad Autónoma de Chile, Centro de Investigación e Innovación, Avenida Del Valle 534, 8581151, Huechuraba, Chile.
Kattia Nuñez-MonteroInstituto de Ciencias Aplicadas, Facultad de Ciencias de la Salud, Universidad Autónoma de Chile, Centro de Investigación e Innovación, Avenida Del Valle 534, 8581151, Huechuraba, Chile.
Patricio Arce-JohnsonInstituto de Ciencias Aplicadas, Facultad de Ingeniería , Universidad Autónoma de Chile, Centro de Investigación e Innovación, Avenida Del Valle 534, 8581151, Huechuraba, Chile.
Neeta Raj SharmaSchool of Bioengineering and Biosciences, Lovely Professional University, Punjab, India.
Arinthip ThamchaipenetDepartment of Genetics, Faculty of Science, Kasetsart University, Bangkok, 10900, Thailand. arinthip.t@ku.ac.th.
Manik Prabhu Narsing RaoInstituto de Ciencias Aplicadas, Facultad de Ingeniería , Universidad Autónoma de Chile, Centro de Investigación e Innovación, Avenida Del Valle 534, 8581151, Huechuraba, Chile. deene.manik@gmail.com.

Funding

The Royal Golden Jubilee Ph.D. Program (RGJ Ph.D.), Thailand Research Fund, National Research Council of Thailand (NRCT) PHD/0136/2561
6 · The paper itself

Abstract

Metagenomic analysis of the hot spring led to the recovery of a high-quality metagenome-assembled genome (MAG), MPNR_HS_01, affiliated with the phylum Actinomycetota. Taxonomy analysis assigned the MAG to "Candidatus Solincola", clustering closely with "Candidatus Solincola tengchongensis". MPNR_HS_01 was 2.82 Mb in size, assembled into 27 contigs, with a G+C content of 63.4%, 49 tRNAs, 4 rRNAs, 98.7% completeness, and no detectable contamination. Functional annotation revealed the presence of complete glycolysis and nonoxidative pentose phosphate pathways, while the tricarboxylic acid cycle was incomplete. Notably, MPNR_HS_01 encoded Wood-Ljungdahl pathway, suggesting carbon assimilation. Energy conservation was supported by hydrogenases, heterodisulfide reductase, Rnf complex, and V-type ATPase. Stress adaptation traits included genes for heat shock proteins, proline biosynthesis, and ion transporters involved in osmotic homeostasis. Although lacking flagellar machinery, MPNR_HS_01 possessed type IV pili and genes associated with twitching motility. Secondary metabolite analysis identified a betalactone biosynthetic gene cluster. Genome-relatedness analyses showed that MPNR_HS_01 was distinct from "Candidatus Solincola" species, with both average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values falling below the established species threshold (95-96% ANI and 70% for dDDH), supporting its designation as a novel species, for which we propose the name "Candidatus Solincola uaceae" sp. nov.

Indexed as

ActinobacteriaHot SpringsMetagenomeMetagenomicsBase CompositionGenome, BacterialPhylogenyActinomycetota“Candidatus Solincola uaceae” sp. novHot springWood–Ljungdahl pathway

Identifiers

PMID41629563
PMCPMC12917137

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