ArticleScientific reports2026
Haplotype-level analysis of environmental DNA metabarcoding revealed the biogeography and phylogeography of freshwater fishes in Korean Peninsula.
Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
0 citing papers in PubMed.
No citing paper in PubMed yet.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors.
Funding
Abstract
Environmental DNA (eDNA) metabarcoding is a cost-effective, sensitive, and minimally invasive tool for monitoring fish diversity in freshwater ecosystems. To evaluate its suitability for assessing fish biogeography and phylogeography in Korean streams, we analyzed fish assemblages in three streams—Gilan, Seom, and Oshipcheon—located in different Korean biogeographical subdistricts. Over two sampling campaigns at nine sites, a total of 107 amplicon sequence variants (ASVs) were identified, representing 20 families, 46 genera, and 76 species. Among the 76 detected species, 29 were endemic to freshwater habitats in South Korea and played a significant role in shaping fish communities across the surveyed streams. We identified potential sources of six translocated species to the eastern region by examining their ASVs. After excluding these potential translocations, no endemic fish species were simultaneously detected in all three streams, and the phylogeography of endemic fish species Odontobutis platycephala, Coreoperca herzi, Microphysogobio yaluensis, Coreoleuciscus splendidus, Nipponocypris koreanus, and Koreocobitis rotundicaudata was clearly observed across the three biogeographical regions. Additionally, analysis of relative abundance and presence-absence data of fish communities yielded comparable β-diversity metrics reflecting spatiotemporal variation. The fish communities in the streams exhibited distinct groups, with Gilan showing a closer relationship to Seom than to Oshipcheon, consistent with well-known allopatric studies of freshwater fishes in the Korean Peninsula. Interestingly, we did not find any differences in fish assemblages among the three mesohabitat types (riffle, run, and pool), regardless of the sampling site. Our results highlight the potential of water-derived eDNA metabarcoding for detecting endemic fish, unraveling the biogeography and phylogeography of allopatric populations of freshwater fishes, and providing genetic forensic tools to estimate the original sources of translocated species.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.