Evidence map›Paper›PMID 41629431›Full record

Articlenpj biodiversity2026

FAIR digital twins for biodiversity: enabling data, model, and workflow integration.

Sharif Islam, Hanna Koivula, Carrie Andrew, Julian Lopez Gordillo, Claus Weiland, Dmitry Schigel, Dag Endresen, Christos Arvanitidis, Eli Chadwick, Stian Soiland-Reyes

Abstract read
In one paragraph

Article in npj biodiversity, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Sharif IslamNaturalis Biodiversity Center, Leiden, Netherlands. sharif.islam@naturalis.nl.
Hanna KoivulaCSC - IT Center for Science, Espoo, Finland.
Carrie AndrewRoyal Botanic Gardens, Kew, London, UK.
Julian Lopez GordilloNaturalis Biodiversity Center, Leiden, Netherlands.
Claus WeilandSenckenberg - Leibniz Institution for Biodiversity and Earth System Research, Frankfurt am Main, Germany.
Dmitry SchigelGlobal Biodiversity Information Facility, Copenhagen, Denmark.
Dag EndresenUniversity of Oslo, Oslo, Norway.
Christos ArvanitidisLifeWatch ERIC, Seville, Spain.
Eli ChadwickUniversity of Manchester, Manchester, UK.
Stian Soiland-ReyesUniversity of Manchester, Manchester, UK.

Funding

HORIZON EUROPE Research Infrastructures 101057437
6 · The paper itself

Abstract

The biodiversity crisis demands computational tools to integrate and analyse complex, disparate data and models. This paper presents the concept of FAIR Digital Twins (FDTs) and, drawing on the work of the Biodiversity Digital Twin (BioDT) project (2022-2025), demonstrates how combining Digital Twins with FAIR principles (Findable, Accessible, Interoperable, and Reusable) can transform biodiversity research and decision-making. We show strategies for integrating heterogeneous data, models, and computational workflows within a FAIR framework, paving the way for operational FDTs. The BioDT project developed ten prototype digital twins addressing a critical range of challenges, including grassland and forest dynamics, bird monitoring, ecosystem services, and crop wild relative genetic resources. We discuss implementation challenges such as data fragmentation, semantic interoperability, and operational complexity. Critically, we highlight the opportunities for dynamic adaptation, modular workflows, and cross-domain collaboration, detailing how tools like Research Object Crate (RO-Crate) operationalise FAIR principles for metadata packaging and standardisation. This convergence of Digital Twins with FAIR principles offers a scalable and reusable approach to advancing biodiversity modeling and simulation, providing a robust foundation for evidence-based policy decisions.

Identifiers

PMID41629431
PMCPMC12864969

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.