A chromosome-level genome assembly for the mulberry thrips Pseudodendrothrips mori (Thysanoptera: Thripidae).

De-Long Guan, Yue-Mei Li, Shi-Hao Zhang, Yue Qin, Nan Wei, Lei Xin, Xiao-Dong Li

Abstract readDataset

In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in

0citing papers in PubMed

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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

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2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors.

De-Long GuanGuangxi Key Laboratory of Sericulture Ecology and Intelligent Technology Application, Guangxi Collaborative Innovation Center of Modern Sericulture and Silk, Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, School of Chemistry and Bioengineering, Hechi University, Hechi, 546300, China.ORCID http://orcid.org/0000-0001-6866-0943

Yue-Mei LiGuangxi Key Laboratory of Sericulture Ecology and Intelligent Technology Application, Guangxi Collaborative Innovation Center of Modern Sericulture and Silk, Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, School of Chemistry and Bioengineering, Hechi University, Hechi, 546300, China.

Shi-Hao ZhangGuangxi Key Laboratory of Sericulture Ecology and Intelligent Technology Application, Guangxi Collaborative Innovation Center of Modern Sericulture and Silk, Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, School of Chemistry and Bioengineering, Hechi University, Hechi, 546300, China.

Yue QinGuangxi Key Laboratory of Sericulture Ecology and Intelligent Technology Application, Guangxi Collaborative Innovation Center of Modern Sericulture and Silk, Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, School of Chemistry and Bioengineering, Hechi University, Hechi, 546300, China.

Nan WeiGuangxi Key Laboratory of Sericulture Ecology and Intelligent Technology Application, Guangxi Collaborative Innovation Center of Modern Sericulture and Silk, Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, School of Chemistry and Bioengineering, Hechi University, Hechi, 546300, China.

Lei XinGuangxi Key Laboratory of Sericulture Ecology and Intelligent Technology Application, Guangxi Collaborative Innovation Center of Modern Sericulture and Silk, Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, School of Chemistry and Bioengineering, Hechi University, Hechi, 546300, China.

Xiao-Dong LiGuangxi Key Laboratory of Sericulture Ecology and Intelligent Technology Application, Guangxi Collaborative Innovation Center of Modern Sericulture and Silk, Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, School of Chemistry and Bioengineering, Hechi University, Hechi, 546300, China. lxdong_627@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mulberry thrips, Pseudodendrothrips mori Niwa, is a significant agricultural pest whose genomic study has been hindered by a lack of reference data. Here, we present the first high-quality, chromosome-level genome assembly for this pest. The genome was assembled using 10.24 Gb of PacBio HiFi long reads, polished with 16.87 Gb of Illumina short reads, and scaffolded using 17.61 Gb of Hi-C data. The final assembly spans 280.93 Mb, with 98.65% of the sequence anchored into 19 pseudochromosomes. The assembly exhibits exceptional contiguity (contig N50: 1.51 Mb; scaffold N50: 14.52 Mb) and high base-level accuracy (QV: 42.82). We identified 18.32% (51.47 Mb) of the genome as repetitive elements and predicted 13,429 protein-coding genes, of which 98.68% were functionally annotated by NR and Interproscan. The quality of this assembly is further validated by a high BUSCO score (98.0% complete genes from the insecta_odb12 dataset). This genomic resource provides a critical foundation for research into pest genetics, insecticide resistance, and the evolution of Thysanoptera.

Indexed as

Chromosomes, InsectGenome, InsectThysanopteraAnimals

Identifiers

PMID41629340

DOI10.1038/s41597-026-06697-3

PMCPMC12966384

What OpenQuestion holds

Textmetadata

LicenceCC BY-NC-ND

Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.