Evidence map›Paper›PMID 41629327›Full record

ArticleScientific data2026

Chromosome-level genome assembly of the Siniperca obscura.

Haiyang Liu, Huijuan Liu, Kai Cui, Wenxuan Lu, Jing Li, Ting Fang, Na Gao, Cheng Chen, Xiuxia Zhao, Kun Yang and 2 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Haiyang LiuKey Laboratory of Tropical and Subtropical Fishery Resources Application and Cultivation, Ministry of Agriculture and Rural Affairs, Pearl River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Guangzhou, 510380, China. hyliu@prfri.ac.cn.ORCID http://orcid.org/0000-0001-8301-4595
Huijuan LiuKey Laboratory of Tropical and Subtropical Fishery Resources Application and Cultivation, Ministry of Agriculture and Rural Affairs, Pearl River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Guangzhou, 510380, China.
Kai CuiKey Laboratory of Freshwater Aquaculture and Enhancement of Anhui Province, Fisheries Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230001, China.
Wenxuan LuKey Laboratory of Freshwater Aquaculture and Enhancement of Anhui Province, Fisheries Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230001, China.
Jing LiKey Laboratory of Freshwater Aquaculture and Enhancement of Anhui Province, Fisheries Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230001, China.
Ting FangKey Laboratory of Freshwater Aquaculture and Enhancement of Anhui Province, Fisheries Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230001, China.
Na GaoKey Laboratory of Freshwater Aquaculture and Enhancement of Anhui Province, Fisheries Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230001, China.
Cheng ChenKey Laboratory of Freshwater Aquaculture and Enhancement of Anhui Province, Fisheries Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230001, China.
Xiuxia ZhaoKey Laboratory of Freshwater Aquaculture and Enhancement of Anhui Province, Fisheries Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230001, China.
Kun YangKey Laboratory of Freshwater Aquaculture and Enhancement of Anhui Province, Fisheries Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230001, China.
Yanfeng LinFishery Bureau of Xiuning County, Huangshan, 245400, China. linyf@yeah.net.
Yangyang LiangKey Laboratory of Freshwater Aquaculture and Enhancement of Anhui Province, Fisheries Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230001, China. liangyy10214@126.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Siniperca obscura is an economically valuable and ecologically significant species in China, yet the lack of comprehensive genomic resources has hindered genetic studies and breeding efforts. In this study, we present a high-quality, chromosome-level genome assembly for S. obscura, generated by integrating PacBio HiFi long-read sequencing with Hi-C scaffolding. The final assembly spans 734.12 Mb, with 99.85% of the assembled bases anchored and oriented onto 24 chromosomes. It achieves a contig N50 of 24.59 Mb and a scaffold N50 of 30.62 Mb, with high genome completeness further demonstrated by a BUSCO score of 99.37%. We predicted 23,225 protein-coding genes, with a 99.12% BUSCO completeness, and 98.50% of the genes were functionally annotated. Approximately 30.54% of the genome sequences were classified as repeat elements. This high-quality reference genome provides a valuable resource for advancing molecular breeding, comparative genomics, and evolutionary studies of S. obscura and closely related species.

Indexed as

PerciformesGenome

Identifiers

PMID41629327
PMCPMC12966407

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.