Evidence map›Paper›PMID 41628238›Full record

ArticlePLoS biology2026

DNA damage induced by HIV-1 Vpr triggers epigenetic remodeling and transcriptional programs to enhance virus transcription and latency reactivation.

Nicholas Saladino, Emily Leavitt, Hoi Tong Wong, Jae-Hoon Ji, Diako Ebrahimi, Daniel J Salamango

Abstract read
In one paragraph

Article in PLoS biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Epigenetic mechanisms of HIV and opioid-induced neuropathology: Potential therapies and interventions.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Nicholas SaladinoDepartment of Microbiology, Immunology, and Molecular Genetics, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, United States of America.
Emily LeavittDepartment of Microbiology, Immunology, and Molecular Genetics, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, United States of America.
Hoi Tong WongDepartment of Microbiology, Mt. Sinai School of Medicine: Icahn School of Medicine, New York, New York, United States of America.
Jae-Hoon JiDepartment of Biochemistry and Structural Biology and Greehey Children's Cancer Research Institute, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, United States of America.
Diako EbrahimiTexas Biomedical Research Institute, San Antonio, Texas, United States of America.
Daniel J SalamangoDepartment of Microbiology, Immunology, and Molecular Genetics, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, United States of America.ORCID https://orcid.org/0000-0002-5483-2684

Funding

Viral and host determinants of donor-specific anti-HIV/SIV immunity mediated by APOBEC3-enzymeR01AI179465 · NIAID · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI Diako Ebrahimi · 2024 to 2026
$2.5M
Impact of Vpr-induced epigenetic remodeling on HIV persistenceR01AI189230 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Daniel James Salamango · 2025 to 2026
$1.2M
NIAID NIH HHS R01 AI179465NIAID NIH HHS R01 AI189230
6 · The paper itself

Abstract

Hijacking of host DNA damage repair (DDR) pathways to facilitate virus replication is broadly conserved amongst diverse viral families. It has been well established that the HIV-1 accessory protein Vpr induces constitutive DDR signaling and G2/M cell cycle arrest, but the virologic function of this activity remains unclear. Here, we use a combination of functional, pharmacologic, biochemical, and genetic approaches to establish that virion-associated and de novo Vpr proteins induce DDR responses that trigger global epigenetic remodeling and activation of transcription programs to enhance HIV-1 promoter activity during acute infection and reactivation from latency. Functional, genetic, and bimolecular fluorescence complementation experiments reveal that Vpr segregates into two functionally discrete pools-a multimeric pool in the nucleus associated with chromatin and a monomeric pool in the cytoplasm associated with a host E3-ubiquitin ligase. Vpr-induced DDR and epigenetic remodeling activities are present in common HIV-1 subtypes circulating globally and in patient-derived isolates.

Indexed as

DNA DamageEpigenesis, GeneticHIV-1Viral TranscriptionVirus ActivationVirus Latencyvpr Gene Products, Human Immunodeficiency VirusDNA RepairHumansPromoter Regions, GeneticTranscription, Geneticvpr Gene Products, Human Immunodeficiency Virusvpr protein, Human immunodeficiency virus 1

Identifiers

PMID41628238
PMCPMC12875578

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.