Evidence map›Paper›PMID 41627744›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2026

Mapping Trypanosoma Protein Interactome by Proximity-Dependent Biotinylation.

Chethan K Krishna, Ralf Erdmann, Vishal C Kalel

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Article in Methods in molecular biology (Clifton, N.J.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Chethan K KrishnaDepartment of Systems Biochemistry, Institute of Biochemistry and Pathobiochemistry, Faculty of Medicine, Ruhr University Bochum, Bochum, Germany.
Ralf ErdmannDepartment of Systems Biochemistry, Institute of Biochemistry and Pathobiochemistry, Faculty of Medicine, Ruhr University Bochum, Bochum, Germany.
Vishal C KalelDepartment of Systems Biochemistry, Institute of Biochemistry and Pathobiochemistry, Faculty of Medicine, Ruhr University Bochum, Bochum, Germany. vishal.kalel@ruhr-uni-bochum.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proximity labeling techniques, such as BioID and TurboID, have emerged as modern tools for studying protein-protein interactions (PPIs) in cells. TurboID is a highly efficient biotin ligase that biotinylates proximal proteins in living cells when fused to a bait protein. These biotinylated proteins are enriched using a pull-down assay with streptavidin beads and identified through proteomic analysis, revealing the interactome of the target protein. Here, we describe proximity labeling using TurboID fused to Trypanosoma brucei PEX19, an essential cytosolic protein and a receptor for newly synthesized glycosomal membrane proteins, to identify its interactome. Understanding these interactions can be crucial for identifying new drug targets to combat these parasites. This powerful approach for mapping interactomes can be applied broadly to other organisms, including plants, yeast, and mammalian systems.

Indexed as

Protein Interaction MappingProteomicsProtozoan ProteinsTrypanosoma brucei bruceiBiotinylationMembrane ProteinsProtein BindingMembrane ProteinsProtozoan ProteinsBioIDBiotinylationLeishmaniaProtein–protein interactionProteomicsProximity labelingTrypanosomaTurboID

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.