Evidence map›Paper›PMID 41620411›Full record

ArticleNature communications2026

Tomato antiviral ubiquitin-proteasome system recognizes viral 59 kDa protein to confer tomato chlorosis virus resistance.

Dan Zhao, Xiaoqian Liu, Hongbo Li, Tianchen Xia, Qi Jia, Peidong Li, Qing Shan, Changqian Li, Hui Li, Yilei Gai and 6 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Plant-Derived Melatonin Inhibits Bacterial Virulence via CpxA/R Two-Component System.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Dan Zhao *College of Horticulture Science and Engineering, Shandong Agricultural University, Taian, China.ORCID 0009-0000-7176-505X
Xiaoqian Liu *College of Horticulture Science and Engineering, Shandong Agricultural University, Taian, China.ORCID 0009-0008-0208-7089
Hongbo Li *College of Horticulture Science and Engineering, Shandong Agricultural University, Taian, China.ORCID 0000-0003-1579-4600
Tianchen XiaCollege of Horticulture Science and Engineering, Shandong Agricultural University, Taian, China.ORCID 0009-0005-0521-0220
Qi JiaCollege of Horticulture Science and Engineering, Shandong Agricultural University, Taian, China.ORCID 0009-0000-9477-5568
Peidong LiCollege of Horticulture Science and Engineering, Shandong Agricultural University, Taian, China.ORCID 0009-0009-1987-0130
Qing ShanCollege of Horticulture Science and Engineering, Shandong Agricultural University, Taian, China.ORCID 0009-0002-7473-2493
Changqian LiCollege of Horticulture Science and Engineering, Shandong Agricultural University, Taian, China.ORCID 0009-0005-8303-4066
Hui LiCollege of Horticulture Science and Engineering, Shandong Agricultural University, Taian, China.ORCID 0009-0006-5323-1832
Yilei GaiCollege of Horticulture Science and Engineering, Shandong Agricultural University, Taian, China.ORCID 0009-0009-2755-3207
Tao LinChina Agricultural University, Beijing, China.ORCID 0000-0003-3647-0488
Lianyi ZangCollege of Plant Protection, Shandong Agricultural University, Taian, China.ORCID 0009-0007-3277-8115
Tao ZhouChina Agricultural University, Beijing, China.ORCID 0000-0001-7702-8472
Jin-Wei WeiInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China. jinwei_wei8bio@163.com.ORCID 0000-0002-0159-984X
Xiaoping ZhuCollege of Plant Protection, Shandong Agricultural University, Taian, China. Zhuxp@sdau.edu.cn.ORCID 0000-0001-7236-731X
Biao GongCollege of Horticulture Science and Engineering, Shandong Agricultural University, Taian, China. gongbiao@sdau.edu.cn.ORCID 0000-0003-3700-5967

Funding

China Postdoctoral Science Foundation 2024M761852National Natural Science Foundation of China (National Science Foundation of China) 32502807National Natural Science Foundation of China (National Science Foundation of China) 32573008, and 32272697Taishan Scholar Foundation of Shandong Province tsqn202306139
6 · The paper itself

Abstract

Viral diseases critically impact crop yields, necessitating insights into plant-pathogen recognition and resistance. In tomato (Solanum lycopersicum), tomato chlorosis virus (ToCV) employs 59 kDa protein (p59) to facilitate movement and degrade the host Catalase1 (SlCAT1), disrupting redox homeostasis. Importantly, tomato has evolved an antiviral ubiquitin-proteasome system (UPS) featuring the Antiviral E2 ubiquitin-conjugating enzyme (SlAVE2) and Antiviral E3 ubiquitin ligase (SlAVE3) pair, which specifically recognizes p59 to trigger antiviral defenses. During infection, this system ubiquitinates SlWRKY6, alleviating its repression of SlAVE3 and creating a positive feedback loop that enhances SlAVE3 expression. SlAVE3 then targets p59 for ubiquitination and degradation, inhibiting viral spread. Notably, p59 co-opts this UPS to degrade SlCAT1, illustrating a counter-defense interplay. Domestication analysis reveals selection of AVE3 from S. pimpinellifolium to S. lycopersicum, with SpAVE3 conferring stronger ToCV resistance than SlAVE3 through improved p59 targeting and reduced SlCAT1 degradation. This study unveils a domesticated antiviral UPS, providing a foundation for breeding ToCV-resistant tomatoes.

Indexed as

CrinivirusDisease ResistancePlant DiseasesProteasome Endopeptidase ComplexSolanum lycopersicumUbiquitinViral ProteinsGene Expression Regulation, PlantHost-Pathogen InteractionsPlant ProteinsPlants, Genetically ModifiedUbiquitinationUbiquitin-Protein LigasesPlant ProteinsProteasome Endopeptidase ComplexUbiquitinUbiquitin-Protein LigasesViral Proteins

Identifiers

PMID41620411
PMCPMC12963576

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.