Evidence map›Paper›PMID 41620399›Full record

ArticleNature communications2026

Discover the maze-like network for glabridin biosynthesis.

Zhen Zhang, Wenqiang Li, Fanze Meng, Yanming Jin, Wentao Sun, Qina Kuang, Shichao Ren, Wei Liu, Liang Zhang, Lei Qin and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Characterization of two key cytochrome P450 enzymes inSynthetic and systems biotechnology · 2027
    Article
  2. Article
  3. Review
  4. Biosynthesis of Sciadonic Acid Derived from Gymnosperms with Anti-Colitis Activity.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Zhen ZhangDepartment of Chemical Engineering, Key Laboratory for Industrial Biocatalysis of Ministry of Education, Tsinghua University, Beijing, China.
Wenqiang LiDepartment of Chemical Engineering, Key Laboratory for Industrial Biocatalysis of Ministry of Education, Tsinghua University, Beijing, China.
Fanze MengDepartment of Chemical Engineering, Key Laboratory for Industrial Biocatalysis of Ministry of Education, Tsinghua University, Beijing, China.
Yanming JinDepartment of Chemical Engineering, Key Laboratory for Industrial Biocatalysis of Ministry of Education, Tsinghua University, Beijing, China.
Wentao SunDepartment of Chemical Engineering, Key Laboratory for Industrial Biocatalysis of Ministry of Education, Tsinghua University, Beijing, China.ORCID 0000-0002-3467-501X
Qina KuangDepartment of Chemical Engineering, Key Laboratory for Industrial Biocatalysis of Ministry of Education, Tsinghua University, Beijing, China.
Shichao RenInstitute of Biochemical Engineering, School of Chemistry and Chemical Engineering, Key Laboratory of Medical Molecule Science and Pharmaceutical Engineering, Ministry of Industry and Information Technology, Beijing Institute of Technology, Beijing, China.
Wei LiuDepartment of Chemical Engineering, Key Laboratory for Industrial Biocatalysis of Ministry of Education, Tsinghua University, Beijing, China.
Liang ZhangInstitute of Biochemical Engineering, School of Chemistry and Chemical Engineering, Key Laboratory of Medical Molecule Science and Pharmaceutical Engineering, Ministry of Industry and Information Technology, Beijing Institute of Technology, Beijing, China.
Lei QinDepartment of Chemical Engineering, Key Laboratory for Industrial Biocatalysis of Ministry of Education, Tsinghua University, Beijing, China. qinleithu@tsinghua.edu.cn.ORCID 0000-0002-9089-4348
Bo LvInstitute of Biochemical Engineering, School of Chemistry and Chemical Engineering, Key Laboratory of Medical Molecule Science and Pharmaceutical Engineering, Ministry of Industry and Information Technology, Beijing Institute of Technology, Beijing, China. lv-b@bit.edu.cn.ORCID 0000-0001-7879-0741
Haiyang JiaInstitute of Biochemical Engineering, School of Chemistry and Chemical Engineering, Key Laboratory of Medical Molecule Science and Pharmaceutical Engineering, Ministry of Industry and Information Technology, Beijing Institute of Technology, Beijing, China. haiyangjia@bit.edu.cn.ORCID 0000-0002-8330-5031
Chun LiDepartment of Chemical Engineering, Key Laboratory for Industrial Biocatalysis of Ministry of Education, Tsinghua University, Beijing, China. lichun@tsinghua.edu.cn.ORCID 0000-0003-4262-6848

Funding

National Natural Science Foundation of China (National Science Foundation of China) 22138006National Natural Science Foundation of China (National Science Foundation of China) 22278240National Natural Science Foundation of China (National Science Foundation of China) 22478031National Natural Science Foundation of China (National Science Foundation of China) 22478032National Natural Science Foundation of China (National Science Foundation of China) 22508219
6 · The paper itself

Abstract

Flavonoid diversity arises from modifications of a few precursors by tailored enzymes, yet the complexity of their evolved metabolic networks complicates pathway elucidation and design. Here, by combining chromosome-scale genome assembly with large-scale transcriptome analysis, we identify and reconstruct the glabridin biosynthetic pathway in yeast, enabling de novo production of this antioxidant flavonoid from Glycyrrhiza glabra L. By analyzing 183 licorice transcriptomes, we discover four classes of enzymes capable of modify isoflavan scaffolds. Among 13 theoretical routes, we validate six functional pathways, revealing a ladder-like, multi-route tailoring network. This network features a multi-step "protection-deprotection" mechanism driven by a dynamic methylation-demethylation cycle that regulate intermediate hydrophilicity and enzyme affinity, thereby enabling species-specific glabridin synthesis. Reconstruction of this network in yeast shows that metabolic redundancy and interconnectivity enhance robustness and yield compared to single-route designs. These results establish a biosynthetic paradigm with broad implications for natural product discovery and biomanufacturing.

Indexed as

Biosynthetic PathwaysGlycyrrhizaIsoflavonesPhenolsGene Expression ProfilingMetabolic Networks and PathwaysSaccharomyces cerevisiaeTranscriptomeglabridinIsoflavonesPhenols

Identifiers

PMID41620399
PMCPMC12963581

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.