Evidence map›Paper›PMID 41618188›Full record

ArticleBMC infectious diseases2026

Mutations in sugar metabolism-related genes driving global drug-resistant Mycobacterium tuberculosis transmission revealed by whole-genome sequencing.

Yameng Li, Yifan Li, Xianglong Kong, Ningning Tao, Yawei Hou, Qilin Han, Yuzhen Zhang, Fei Long, Yao Liu, Huaichen Li

Abstract read
In one paragraph

Article in BMC infectious diseases, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. A Case of Transmission of Bedaquiline- and Linezolid-Resistant Tuberculosis.International journal of molecular sciences · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yameng LiDepartment of Pulmonary and Critical Care Medicine, The Third Affiliated Hospital of Shandong First Medical University (Affiliated Hospital of Shandong Academy of Medical Sciences), Jinan, Shandong, 250031, China.
Yifan LiDepartment of Pulmonary and Critical Care Medicine, The Third Affiliated Hospital of Shandong First Medical University (Affiliated Hospital of Shandong Academy of Medical Sciences), Jinan, Shandong, 250031, China.
Xianglong KongArtificial Intelligence Institute, Qilu University of Technology (Shandong Academy of Sciences), Jinan, Shandong, 250011, China.
Ningning TaoDepartment of Pulmonary and Critical Care Medicine, Shandong Provincial Hospital Affiliated to Shandong First Medical University, Jinan, Shandong, 250021, China.
Yawei HouQilu Second Hospital of Shandong University, Jinan, Shandong, 250033, China.
Qilin HanShandong First Medical University & Shandong Academy of Medical Sciences, Jinan, Shandong, 250117, China.
Yuzhen ZhangShandong First Medical University & Shandong Academy of Medical Sciences, Jinan, Shandong, 250117, China.
Fei LongDepartment of Pulmonary and Critical Care Medicine, The Third Affiliated Hospital of Shandong First Medical University (Affiliated Hospital of Shandong Academy of Medical Sciences), Jinan, Shandong, 250031, China. earlf792002@163.com.
Yao LiuDepartment of Pulmonary and Critical Care Medicine, Shandong Provincial Hospital Affiliated to Shandong First Medical University, Jinan, Shandong, 250021, China. doctorliu@126.com.
Huaichen LiDepartment of Pulmonary and Critical Care Medicine, Shandong Provincial Hospital Affiliated to Shandong First Medical University, Jinan, Shandong, 250021, China. lihuaichen@163.com.

Funding

Department of Science & Technology of Shandong Province No. 2007GG30002033; No. 2017GSF218052Jinan Science and Technology Bureau No. 201704100Natural Science Foundation of Shandong Province No. ZR2020KH013; No. ZR2021MH006
6 · The paper itself

Abstract

backgroundTuberculosis (TB) continues to represent a significant global health challenge, particularly due to the emergence of drug-resistant strains that hinder TB control initiatives. Elucidating the mechanisms underlying the proliferation of drug-resistant strains is essential for developing effective strategies to address this public health threat.

methodsWhole-genome sequencing was conducted on 13,525 Mycobacterium tuberculosis isolates. Genes associated with sugar metabolism were obtained from the National Center for Biotechnology Information (NCBI) Gene database. Analytical approaches, including Random Forests, Gradient Boosting Decision Trees, and Generalized Linear Mixed Models were used to identify mutation sites in sugar metabolism genes that contribute to transmission of Multidrug-Resistant Tuberculosis (MDR-TB).

resultsSignificant associations were identified between specific gene mutations and transmission clusters in MDR-TB. Notable mutations include Rv0650 (C113T, C316T), sugB C734A, epiA C43T, Rv151c C8G, Rv1520 (C138T, T618C, A649C), Rv2038c G282A, Rv2039c (G391T, T283G), Rv2040c G835C, Rv2316 C161G, and sugI C1268T. Additionally, mutations associated with MDR-TB transmission clusters, include Rv0650 C316T, Rv151c T809C, and Rv2039c C794T. Certain mutations, such as Rv0539 G588T and uspA G379C, were found to increase the risk of cross-regional transmission in MDR clades. The presence of Rv1512 (epiA, C462T) and Rv2038c T161G was associated with an increased therisk of developing MDR isolates compared to single drug resistant (SDR) isolates.

conclusionMutations in sugar metabolism genes significantly contribute to the global transmission of MDR-TB. Identifing these genetic determinants canguide targeted interventions to control drug-resistant strains and improve TB management. Further research is required to elucidate mechanism underlying mechanisms of transmission and resistance development. CLINICAL TRIAL NUMBER: Not applicable.

Indexed as

Carbohydrate MetabolismMutationMycobacterium tuberculosisTuberculosis, Multidrug-ResistantWhole Genome SequencingAntitubercular AgentsBacterial ProteinsDrug Resistance, Multiple, BacterialGenome, BacterialHumansAntitubercular AgentsBacterial ProteinsGene mutationMultidrug-resistant tuberculosisMycobacterium tuberculosisSugar metabolismWhole-genome sequencing

Identifiers

PMID41618188
PMCPMC12930972

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.