Evidence map›Paper›PMID 41603554›Full record

ArticleThe ISME journal2026

Pseudomonadota bridge cross-trophic interactions to suppress plant pathogens.

Huiyu Chuai, Gen Li, Luchen Tao, Lei Ouyang, Ruihan Ruan, Zhong Wei, Joann Whalen, Uffe N Nielsen, Ting Liu, Huixin Li

Abstract read
In one paragraph

Article in The ISME journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Huiyu ChuaiAsia Hub on Agriculture, Sanya Institute of Nanjing Agricultural University, Sanya, Hainan 572024, China.
Gen LiAsia Hub on Agriculture, Sanya Institute of Nanjing Agricultural University, Sanya, Hainan 572024, China.
Luchen TaoAsia Hub on Agriculture, Sanya Institute of Nanjing Agricultural University, Sanya, Hainan 572024, China.
Lei OuyangAsia Hub on Agriculture, Sanya Institute of Nanjing Agricultural University, Sanya, Hainan 572024, China.
Ruihan RuanAsia Hub on Agriculture, Sanya Institute of Nanjing Agricultural University, Sanya, Hainan 572024, China.
Zhong WeiJiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, Nanjing Agricultural University, Nanjing, Jiangsu 210095, China.ORCID 0000-0002-7967-4897
Joann WhalenDepartment of Natural Resource Sciences, McGill University, Montreal, QC H9X 3V9, Canada.
Uffe N NielsenHawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW 2751, Australia.ORCID 0000-0003-2400-7453
Ting LiuAsia Hub on Agriculture, Sanya Institute of Nanjing Agricultural University, Sanya, Hainan 572024, China.ORCID 0000-0002-3862-1182
Huixin LiAsia Hub on Agriculture, Sanya Institute of Nanjing Agricultural University, Sanya, Hainan 572024, China.

Funding

China Postdoctoral Science Foundation 2024M761143China Postdoctoral Science Foundation 2025T180695Fundamental Research Funds for the Central Universities KJYQ2025052Fundamental Research Funds for the Central Universities KYQN2023048Jiangsu Funding Program for Excellent Postdoctoral Talent 2025ZB654National Natural Science Foundation of China 32522068National Natural Science Foundation of China 42577332National Natural Science Foundation of Jiangsu Province, China BK20250195Postdoctoral Fellowship Program of CPSF GZC20251618
6 · The paper itself

Abstract

Trait-mediated interactions across trophic levels drive trophic cascades in macroecological systems, yet their relevance in microbially dominated soil ecosystems remains underexplored. We combined a regional field survey with controlled experiments using a defined 122-strain synthetic bacterial community and bacterivorous nematodes to test whether faunal predation reorganizes root-associated microbiomes to suppress soilborne disease. Field observations showed that sites with stronger nematode-Pseudomonadota associations had lower bacterial wilt incidence. In controlled experiments, nematode predation selectively enriched Pseudomonadota in the rhizosphere and reduced Ralstonia solanacearum populations and disease incidence. Preferential grazing drove this enrichment: Pseudomonadota constituted over 95% of sequences in nematode guts, and focal taxa showed moderate antagonism, small cell size, and high metabolic activity. Together, these results identify Pseudomonadota as key bridging taxa in cross-trophic interactions. Trait-linked responses to predation contribute to pathogen suppression and suggest a biocontrol framework that integrates microbial traits with trophic connectivity.

Indexed as

NematodaPlant DiseasesSoil MicrobiologyAnimalsAntibiosisMicrobiotaPlant RootsRalstonia solanacearumRhizospherebacterial traitsplant pathogenspredator–prey interactionssoil nematodes

Identifiers

PMID41603554
PMCPMC12904284

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.